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Report for CCDS43145.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43145.1 Public Homo sapiens 3 ZXDC 24 110 108 CCDS HistoryNCBI Gene:79364Re-query CCDS DB by CCDS ID:43145.1Re-query CCDS DB by GeneID:79364See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43145.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389709.8 ENSP00000374359.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389709.8Link to Ensembl Protein Viewer:ENSP00000374359.3Re-query CCDS DB by Nucleotide ID:ENST00000389709Re-query CCDS DB by Protein ID:ENSP00000374359
Original member Current member NCBI NM_025112.5 NP_079388.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025112.5Link to Protein Sequence:NP_079388.3Re-query CCDS DB by Nucleotide ID:NM_025112Re-query CCDS DB by Protein ID:NP_079388Link to BLAST:NP_079388.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079388.3 858 Q2QGD7-1 858 100% 0 0

Chromosomal Locations for CCDS 43145.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 126438375 126438461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126439632 126439727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126441765 126441946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126459653 126459737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126461535 126462220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126466155 126466325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126470895 126471025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126471973 126472051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126472153 126472305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126474959 126475865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2577 nt):
ATGGACCTCCCGGCGCTGCTCCCCGCCCCGACTGCGCGCGGAGGGCAACATGGCGGCGGCCCCGGCCCGC
TCCGCCGAGCCCCAGCGCCGCTCGGCGCGAGCCCCGCGCGCCGCCGCCTGCTACTGGTGCGGGGCCCTGA
AGATGGCGGGCCCGGGGCGCGGCCCGGGGAGGCCTCCGGGCCAAGCCCGCCGCCCGCCGAGGACGACAGC
GACGGCGACTCTTTCTTGGTGCTGCTGGAAGTGCCGCACGGCGGCGCTGCCGCCGAGGCTGCCGGATCAC
AGGAGGCCGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCCCCGAGCAGGGCCCCAGCGGCCCGGCCGC
CCCCCCCGGCCCTGGCGTAGCCCCGGCGGGCGCCGTCACCATCAGCAGCCAGGACCTGCTGGTGCGTCTC
GACCGCGGCGTCCTCGCGCTGTCTGCGCCGCCCGGCCCCGCAACCGCGGGCGCCGCCGCTCCCCGCCGCG
CGCCCCAGGCCTCCGGCCCCAGCACGCCCGGCTACCGCTGCCCCGAGCCGCAGTGCGCGCTGGCCTTCGC
CAAGAAGCACCAGCTCAAGGTGCACCTGCTCACGCACGGCGGCGGTCAGGGCCGGCGGCCCTTCAAGTGC
CCACTGGAGGGCTGTGGTTGGGCCTTCACAACGTCCTACAAGCTCAAGCGGCACCTGCAGTCGCACGACA
AGCTGCGGCCCTTCGGCTGTCCAGTGGGCGGCTGTGGCAAGAAGTTCACTACGGTCTATAACCTCAAGGC
GCACATGAAGGGCCACGAGCAGGAGAGCCTGTTCAAGTGCGAGGTGTGCGCCGAGCGCTTCCCCACGCAC
GCCAAGCTCAGCTCCCACCAGCGCAGCCACTTCGAGCCCGAGCGCCCTTACAAGTGTGACTTTCCCGGCT
GTGAGAAGACATTTATCACAGTGAGTGCCCTGTTTTCCCATAACCGAGCCCACTTCAGGGAACAAGAGCT
CTTTTCCTGCTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAGCCTGTCGGCTGAAAATTCACCTGCGG
AGCCATACAGGTGAAAGACCATTTATTTGTGACTCTGACAGCTGTGGCTGGACCTTCACCAGCATGTCCA
AACTTCTAAGGCACAGAAGGAAACATGACGATGACCGGAGGTTTACCTGCCCTGTCGAGGGCTGTGGGAA
ATCATTCACCAGAGCAGAGCATCTGAAAGGCCACAGCATAACCCACCTAGGCACAAAGCCGTTCGAGTGT
CCTGTGGAAGGATGTTGCGCGAGGTTCTCCGCTCGTAGCAGTCTGTACATTCACTCTAAGAAACACGTGC
AGGATGTGGGTGCTCCGAAAAGCCGTTGCCCAGTTTCTACCTGCAACAGACTCTTCACCTCCAAGCACAG
CATGAAGGCGCACATGGTCAGACAGCACAGCCGGCGCCAAGATCTCTTACCTCAGCTAGAAGCTCCGAGT
TCTCTTACTCCCAGCAGTGAACTCAGCAGCCCAGGCCAAAGTGAGCTCACTAACATGGATCTTGCTGCAC
TCTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAGGCTCTGAACTCCGGAAT
CCTGACTATTGACGTCACTTCTGTGAGCTCCTCTCTGGGAGGGAACCTCCCTGCTAATAATAGCTCCCTA
GGGCCGATGGAACCCCTGGTCCTGGTGGCCCACAGTGATATTCCCCCAAGCCTGGACAGCCCTCTGGTTC
TCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGG
AGCATTAGGCTGTCTGGTGGCTCTGCCCATGAAGAACTTGAGTGACGACCCACTGGCTTTGACCTCCAAT
AGTAACTTAGCAGCACATATCACCACACCGACCTCTTCGAGCACCCCCCGAGAAAATGCCAGTGTCCCGG
AACTGCTGGCTCCAATCAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAAGG
AAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGCTC
AGTGCAGGCACTGGCAACTTCTATTTGGAAAGTGGGGGCTCAGCAAGAACTGATTACCGAGCCATTCAAC
TAGCCAAGGAAAAAAAGCAGAGAGGAGCGGGGAGCAATGCAGGAGCCTCACAGTCTACTCAGAGAAAAAT
AAAAGAAGGCAAAATGAGTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGGTTGTGTGGGAGCCTCGTG
GTGCCCAGCGGAGGACGGCCAGGACCAGCTCCAGCAGCTGGGGTGCAGTGCGGGGCGCAGGGCGTCCAGG
TCCAGCTGGTGCAGGATGACCCCTCCGGCGAAGGTGTCCTGCCCTCGGCCCGCGGCCCAGCCACCTTCCT
CCCCTTCCTCACTGTGGACCTGCCCGTCTACGTCCTCCAGGAGGTGCTCCCCTCATCTGGAGGCCCTGCT
GGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCAGTGA

Translation (858 aa):
MDLPALLPAPTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEASGPSPPPAEDDS
DGDSFLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAPPGPGVAPAGAVTISSQDLLVRL
DRGVLALSAPPGPATAGAAAPRRAPQASGPSTPGYRCPEPQCALAFAKKHQLKVHLLTHGGGQGRRPFKC
PLEGCGWAFTTSYKLKRHLQSHDKLRPFGCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEVCAERFPTH
AKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLR
SHTGERPFICDSDSCGWTFTSMSKLLRHRRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFEC
PVEGCCARFSARSSLYIHSKKHVQDVGAPKSRCPVSTCNRLFTSKHSMKAHMVRQHSRRQDLLPQLEAPS
SLTPSSELSSPGQSELTNMDLAALFSDTPANASGSAGGSDEALNSGILTIDVTSVSSSLGGNLPANNSSL
GPMEPLVLVAHSDIPPSLDSPLVLGTAATVLQQGSFSVDDVQTVSAGALGCLVALPMKNLSDDPLALTSN
SNLAAHITTPTSSSTPRENASVPELLAPIKVEPDSPSRPGAVGQQEGSHGLPQSTLPSPAEQHGAQDTEL
SAGTGNFYLESGGSARTDYRAIQLAKEKKQRGAGSNAGASQSTQRKIKEGKMSPPHFHASQNSWLCGSLV
VPSGGRPGPAPAAGVQCGAQGVQVQLVQDDPSGEGVLPSARGPATFLPFLTVDLPVYVLQEVLPSSGGPA
GPEATQFPGSTINLQDLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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