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Report for CCDS42959.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42959.1 Public Homo sapiens 21 KRTAP10-6 24 110 108 CCDS HistoryNCBI Gene:386674Re-query CCDS DB by CCDS ID:42959.1Re-query CCDS DB by GeneID:386674See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42959.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400368.1 ENSP00000383219.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000400368.1Link to Ensembl Protein Viewer:ENSP00000383219.1Re-query CCDS DB by Nucleotide ID:ENST00000400368Re-query CCDS DB by Protein ID:ENSP00000383219
Original member Current member NCBI NM_198688.3 NP_941961.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198688.3Link to Protein Sequence:NP_941961.3Re-query CCDS DB by Nucleotide ID:NM_198688Re-query CCDS DB by Protein ID:NP_941961Link to BLAST:NP_941961.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941961.3 365 P60371 365 100% 0 0

Chromosomal Locations for CCDS 42959.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44591387 44592484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1098 nt):
ATGGCCGCGTCCACCATGTCCGTCTGCTCCAGCGACCTGAGCTACGGCAGCCGCGTCTGCCTTCCTGGTT
CCTGTGACTCTTGCTCCGACTCCTGGCAGGTGGACGACTGCCCAGAGAGCTGCTGTGAGCCCCCCTGCTG
CGCCCCGGCCCCCTGCCTGAGCCTGGTCTGCACCCCAGTGAGCCGTGTGTCCAGCCCCTGCTGCCCAGTG
ACCTGTGAGCCCAGCCCCTGCCAATCAGGCTGCACCAGCTCCTGCACGCCCTCGTGCTGCCAGCAGTCTA
GCTGCCAGCTGGCTTGCTGTGCCTCCTCCCCCTGCCAGCAGGCCTGCTGCGTGCCCGTCTGCTGCAAGAC
TGTCTGCTGCAAGCCTGTGTGCTGTGTGTCCGTCTGCTGTGGGGATTCTTCATGCTGCCAGCAGTCTAGC
TGCCAGTCAGCTTGCTGCACCTCCTCCCCCTGCCAGCAGGCCTGCTGTGTGCCCGTCTGCTGCAAGCCTG
TCTGCTCTGGGATTTCCTCTTCGTGCTGCCAGCAGTCTAGCTGTGTGAGCTGTGTGTCCAGCCCCTGCTG
CCAGGCGGTCTGTGAGCCCAGCCCCTGCCAATCAGGCTGCACCAGCTCCTGCACACCCTCATGCTGCCAG
CAGTCTAGCTGCCAGCCAACTTGCTGCACCTCCTCCCCCTGCCAGCAGGCCTGCTGCGTGCCCGTCTGCT
GCGTGCCTGTGTGCTGTGTGCCCACCTGCTCTGAGGATTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCA
GCCAGCTTGCTGCACCTCCTCCCCCTGCCAGCACGCCTGCTGTGTGCCCGTCTGCTCTGGGGCTTCCACA
TCATGCTGCCAGCAGTCTAGCTGCCAGCCGGCTTGCTGCACCGCCTCCTGCTGCAGATCCTCCTCCTCCG
TGTCCCTCCTCTGCCACCCTGTGTGCAAGTCCACCTGCTGCGTGCCCGTCCCCTCCTGTGGTGCCTCTGC
CTCCTCCTGCCAGCCCAGCTGCTGCCGCACGGCCTCCTGTGTTTCCCTCCTCTGCCGCCCCATGTGCTCC
CGCCCTGCCTGCTACAGCCTCTGCTCTGGCCAGAAGTCCAGCTGCTGA

Translation (365 aa):
MAASTMSVCSSDLSYGSRVCLPGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSRVSSPCCPV
TCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKPVCCVSVCCGDSSCCQQSS
CQSACCTSSPCQQACCVPVCCKPVCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQ
QSSCQPTCCTSSPCQQACCVPVCCVPVCCVPTCSEDSSSCCQQSSCQPACCTSSPCQHACCVPVCSGAST
SCCQQSSCQPACCTASCCRSSSSVSLLCHPVCKSTCCVPVPSCGASASSCQPSCCRTASCVSLLCRPMCS
RPACYSLCSGQKSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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