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Report for CCDS3729.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3729.1 Public Homo sapiens 4 NUDT6 24 110 108 CCDS HistoryNCBI Gene:11162Re-query CCDS DB by CCDS ID:3729.1Re-query CCDS DB by GeneID:11162See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3729.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339154.6 ENSP00000344011.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339154.6Link to Ensembl Protein Viewer:ENSP00000344011.2Re-query CCDS DB by Nucleotide ID:ENST00000339154Re-query CCDS DB by Protein ID:ENSP00000344011
Original member Current member EBI ENST00000502270.5 ENSP00000424117.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000502270.5Link to Ensembl Protein Viewer:ENSP00000424117.1Re-query CCDS DB by Nucleotide ID:ENST00000502270Re-query CCDS DB by Protein ID:ENSP00000424117
Original member Current member NCBI NM_198041.3 NP_932158.1 Accepted alive Link to Nucleotide Sequence:NM_198041.3Link to Protein Sequence:NP_932158.1Re-query CCDS DB by Nucleotide ID:NM_198041Re-query CCDS DB by Protein ID:NP_932158Link to BLAST:NP_932158.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932158.1 147 P53370-2 147 100% 0 0

Chromosomal Locations for CCDS 3729.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 122892828 122893225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122897624 122897669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGTGGAAGTTTCCAGGAGGCCTGTCAGAGCCTGAAGAAGATATTGGAGACACAGCGGTTCGAGAAGTTT
TTGAAGAGACTGGTATAAAATCAGAATTCAGGTCCGTCCTGAGTATTCGGCAACAGCACACAAATCCTGG
AGCTTTTGGGAAGTCAGATATGTATATCATCTGCCGCCTAAAGCCATATTCATTCACCATAAATTTTTGC
CAGGAAGAATGCTTAAGATGTGAGTGGATGGATCTCAATGACCTGGCGAAGACTGAAAATACAACTCCCA
TCACCAGCAGAGTTGCTAGGCTGCTGCTGTATGGGTACAGAGAAGGGTTTGACAAAATTGACCTGACTGT
GGAAGAACTTCCAGCAGTTTACACAGGACTGTTTTATAAACTCTATCATAAGGAACTGCCAGAGAATTAT
AAAACTATGAAAGGAATTGATTAA

Translation (147 aa):
MWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFC
QEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKLYHKELPENY
KTMKGID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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