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Report for CCDS34965.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34965.2 Public Homo sapiens 8 ADCK5 24 110 108 CCDS HistoryNCBI Gene:203054Re-query CCDS DB by CCDS ID:34965.2Re-query CCDS DB by GeneID:203054See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 34965.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308860.11 ENSP00000310547.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308860.11Link to Ensembl Protein Viewer:ENSP00000310547.6Re-query CCDS DB by Nucleotide ID:ENST00000308860Re-query CCDS DB by Protein ID:ENSP00000310547
Original member Current member NCBI NM_174922.5 NP_777582.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_174922.5Link to Protein Sequence:NP_777582.4Re-query CCDS DB by Nucleotide ID:NM_174922Re-query CCDS DB by Protein ID:NP_777582Link to BLAST:NP_777582.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_777582.4 580 Q3MIX3 580 100% 0 0

Chromosomal Locations for CCDS 34965.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144374096 144374107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144379387 144379490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144383081 144383230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144390671 144390746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144390856 144391056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144391134 144391274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144391361 144391474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144391580 144391711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144391783 144391866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144391941 144392022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144392092 144392170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144392254 144392345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144392445 144392697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144392776 144392892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144392969 144393074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1743 nt):
ATGTGGCGACCGGTGCAGCTCTGTCATTTCCACTCTGCTCTGCTGCACAGCAGGCAGAAGCCCTGGCCGT
CCCCTGCTGTGTTCTTCAGGAGAAACGTCAGGGGCCTTCCTCCAAGGTTCTCCAGCCCCACACCCCTGTG
GAGGAAGGTGCTCTCCACCGCGGTAGTGGGGGCGCCCCTGCTCCTCGGAGCCCGCTATGTCATGGCAGAG
GCACGGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATGGGGCGCTTTGGCAGGTCTCTGAAGGTCG
GCCTGCAGATCTCCCTGGACTACTGGTGGTGCACCAATGTTGTCCTTCGAGGGGTGGAAGAGAACAGCCC
AGGCTACTTGGAGGTGATGTCTGCGTGTCACCAGCGGGCGGCTGATGCCCTGGTGGCAGGGGCCATCAGC
AACGGGGGCCTCTACGTGAAGCTGGGCCAGGGGCTGTGCTCCTTCAACCACCTGCTTCCCCCCGAGTATA
CCCGGACCCTGCGCGTGCTAGAGGACAGGGCCCTCAAGCGGGGCTTCCAGGAGGTGGATGAGTTGTTCCT
TGAGGACTTCCAGGCCCTCCCCCACGAGCTCTTCCAGGAGTTTGACTACCAGCCAATTGCTGCCGCCAGC
CTGGCACAGGTGCACAGAGCCAAGCTGCACGATGGCACCAGCGTGGCTGTGAAGGTGCAGTACATCGACC
TGCGGGACCGCTTTGATGGGGACATCCACACCCTGGAGCTCCTGCTGCGGCTCGTTGAGGTCATGCACCC
CAGCTTTGGCTTCAGCTGGGTCCTCCAGGACCTGAAGGGGACCCTGGCCCAGGAGCTGGACTTCGAGAAT
GAGGGCCGCAACGCAGAGCGCTGTGCGCGGGAGCTGGCGCACTTCCCCTACGTCGTGGTGCCCCGCGTGC
ACTGGGACAAGTCCAGCAAGCGCGTGCTCACTGCCGACTTCTGCGCCGGCTGCAAGGTCAACGATGTGGA
GGCCATCAGGAGCCAGGGGCTGGCAGTGCATGACATAGCAGAAAAGCTCATCAAGGCCTTTGCTGAGCAG
ATATTTTACACCGGCTTCATCCACTCGGACCCACATCCTGGCAACGTTCTGGTGCGGAAAGGCCCGGACG
GGAAAGCGGAGCTGGTGCTGCTGGACCACGGGCTCTACCAGTTCCTGGAGGAGAAGGACCGCGCAGCCCT
CTGCCAGCTGTGGCGGGCCATCATCCTGCGGGACGACGCCGCCATGAGGGCGCACGCAGCCGCACTGGGG
GTGCAAGACTACCTCCTGTTCGCCGAGATGCTCATGCAGCGCCCCGTGCGCCTGGGGCAGCTGTGGGGCT
CGCACCTACTGAGCCGCGAAGAGGCGGCCTACATGGTGGACATGGCCCGCGAGCGCTTCGAGGCCGTCAT
GGCGGTGCTCAGGGAGCTGCCGCGGCCCATGCTGCTGGTGCTGCGCAACATCAACACCGTGCGCGCTATC
AACGTGGCCCTCGGCGCCCCCGTGGACCGCTACTTCCTTATGGCTAAAAGGGCTGTCCGGGGCTGGAGCC
GCCTGGCGGGCGCCACGTATCGGGGTGTCTACGGCACCAGCCTCCTGCGCCACGCCAAGGTCGTCTGGGA
GATGCTCAAGTTTGAAGTGGCGCTCAGGCTGGAGACCTTGGCCATGCGGCTGACCGCCCTCCTGGCTCGT
GCTCTGGTCCACCTGAGCCTCGTGCCCCCAGCGGAGGAGCTCTACCAGTACCTGGAGACCTAG

Translation (580 aa):
MWRPVQLCHFHSALLHSRQKPWPSPAVFFRRNVRGLPPRFSSPTPLWRKVLSTAVVGAPLLLGARYVMAE
AREKRRMRLVVDGMGRFGRSLKVGLQISLDYWWCTNVVLRGVEENSPGYLEVMSACHQRAADALVAGAIS
NGGLYVKLGQGLCSFNHLLPPEYTRTLRVLEDRALKRGFQEVDELFLEDFQALPHELFQEFDYQPIAAAS
LAQVHRAKLHDGTSVAVKVQYIDLRDRFDGDIHTLELLLRLVEVMHPSFGFSWVLQDLKGTLAQELDFEN
EGRNAERCARELAHFPYVVVPRVHWDKSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQ
IFYTGFIHSDPHPGNVLVRKGPDGKAELVLLDHGLYQFLEEKDRAALCQLWRAIILRDDAAMRAHAAALG
VQDYLLFAEMLMQRPVRLGQLWGSHLLSREEAAYMVDMARERFEAVMAVLRELPRPMLLVLRNINTVRAI
NVALGAPVDRYFLMAKRAVRGWSRLAGATYRGVYGTSLLRHAKVVWEMLKFEVALRLETLAMRLTALLAR
ALVHLSLVPPAEELYQYLET


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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