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Report for CCDS34103.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34103.1 Public Homo sapiens 4 MFAP3L 24 110 108 CCDS HistoryNCBI Gene:9848Re-query CCDS DB by CCDS ID:34103.1Re-query CCDS DB by GeneID:9848See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34103.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361618.4 ENSP00000354583.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361618.4Link to Ensembl Protein Viewer:ENSP00000354583.3Re-query CCDS DB by Nucleotide ID:ENST00000361618Re-query CCDS DB by Protein ID:ENSP00000354583
Original member Current member NCBI NM_021647.8 NP_067679.6 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021647.8Link to Protein Sequence:NP_067679.6Re-query CCDS DB by Nucleotide ID:NM_021647Re-query CCDS DB by Protein ID:NP_067679Link to BLAST:NP_067679.6

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067679.6 409 O75121-1 409 100% 0 0

Chromosomal Locations for CCDS 34103.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 169991378 169992309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 170005580 170005877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1230 nt):
ATGGATCGATTGAAGAGCCATCTGACTGTGTGCTTTCTACCTTCTGTGCCCTTTTTAATCCTAGTATCCA
CTCTAGCCACCGCTAAGAGTGTGACTAACAGCACTTTAAATGGCACTAACGTGGTCTTGGGCTCTGTGCC
CGTAATCATTGCCAGAACTGACCATATCATAGTCAAGGAAGGGAACAGTGCCTTGATTAACTGTAGTGTT
TATGGCATCCCTGACCCACAGTTCAAGTGGTATAATTCCATTGGCAAGCTGCTGAAAGAAGAAGAGGATG
AGAAGGAGAGAGGAGGAGGAAAATGGCAAATGCACGACAGCGGCCTCCTGAACATCACCAAGGTATCCTT
CTCAGACCGAGGTAAATACACGTGTGTGGCTTCTAACATCTACGGCACCGTGAACAACACGGTGACCTTG
CGCGTCATCTTCACTTCTGGAGACATGGGTGTCTACTACATGGTCGTGTGCCTGGTGGCCTTCACCATCG
TCATGGTCCTCAATATCACCCGCCTGTGCATGATGAGCAGCCATCTAAAGAAGACTGAGAAGGCCATCAA
TGAGTTCTTTAGGACCGAAGGTGCAGAGAAGCTGCAGAAGGCATTTGAGATCGCCAAGCGCATCCCCATC
ATCACCTCCGCCAAAACTCTAGAGCTTGCCAAAGTCACCCAGTTCAAAACCATGGAGTTCGCCCGCTACA
TCGAAGAGCTTGCCAGGAGCGTGCCTCTGCCGCCTCTCATTATGAACTGCAGGACTATCATGGAGGAGAT
TATGGAGGTGGTTGGGCTGGAGGAGCAGGGGCAGAATTTTGTGAGGCATACTCCAGAGGGCCAGGAGGCC
GCAGACAGGGATGAGGTCTACACAATCCCCAACTCTCTGAAGCGGAGCGACTCCCCTGCCGCTGACTCGG
ACGCCTCATCGCTGCACGAGCAACCTCAGCAAATTGCCATCAAGGTGTCAGTTCACCCGCAGTCCAAAAA
AGAGCATGCAGATGACCAAGAGGGTGGACAGTTTGAAGTCAAAGATGTAGAGGAGACAGAACTGTCGGCG
GAACATTCCCCCGAAACTGCAGAACCTTCTACCGATGTCACGTCCACCGAGCTAACATCTGAAGAGCCAA
CACCTGTTGAGGTACCAGATAAGGTACTGCCGCCAGCTTACCTGGAAGCCACAGAGCCAGCAGTGACACA
TGACAAAAACACCTGCATTATTTACGAAAGCCATGTCTAA

Translation (409 aa):
MDRLKSHLTVCFLPSVPFLILVSTLATAKSVTNSTLNGTNVVLGSVPVIIARTDHIIVKEGNSALINCSV
YGIPDPQFKWYNSIGKLLKEEEDEKERGGGKWQMHDSGLLNITKVSFSDRGKYTCVASNIYGTVNNTVTL
RVIFTSGDMGVYYMVVCLVAFTIVMVLNITRLCMMSSHLKKTEKAINEFFRTEGAEKLQKAFEIAKRIPI
ITSAKTLELAKVTQFKTMEFARYIEELARSVPLPPLIMNCRTIMEEIMEVVGLEEQGQNFVRHTPEGQEA
ADRDEVYTIPNSLKRSDSPAADSDASSLHEQPQQIAIKVSVHPQSKKEHADDQEGGQFEVKDVEETELSA
EHSPETAEPSTDVTSTELTSEEPTPVEVPDKVLPPAYLEATEPAVTHDKNTCIIYESHV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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