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Report for CCDS32866.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32866.1 Public Homo sapiens 19 REXO1 24 110 108 CCDS HistoryNCBI Gene:57455Re-query CCDS DB by CCDS ID:32866.1Re-query CCDS DB by GeneID:57455See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32866.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000170168.9 ENSP00000170168.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000170168.9Link to Ensembl Protein Viewer:ENSP00000170168.3Re-query CCDS DB by Nucleotide ID:ENST00000170168Re-query CCDS DB by Protein ID:ENSP00000170168
Original member Current member NCBI NM_020695.4 NP_065746.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020695.4Link to Protein Sequence:NP_065746.3Re-query CCDS DB by Nucleotide ID:NM_020695Re-query CCDS DB by Protein ID:NP_065746Link to BLAST:NP_065746.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065746.3 1221 Q8N1G1 1221 100% 0 0

Chromosomal Locations for CCDS 32866.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1816066 1816154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1816225 1816345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1816431 1816569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1816698 1816813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1817219 1817329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1817707 1817780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1818482 1818595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1818706 1818843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1819018 1819131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1819934 1820057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1820264 1820395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1821519 1821682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1823572 1823785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1825839 1825943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1826878 1828631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1848202 1848358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3666 nt):
ATGCTACGCTCCACTGGCTTCTTCCGGGCCATTGACTGCCCCTATTGGTCTGGGGCGCCCGGGGGGCCCT
GCCGGCGGCCCTACTGCCACTTCCGGCACCGCGGGGCCCGGGGCTCCGGCGCGCCCGGTGACGGCGGAGA
GGCGCCCCCCGCAGCAGGGCTGGGTTACGACCCCTACAACCCTGAGCTGCCCAAGCCCCCCGCGCAGAGG
GAGAATGGCACCCTGGGCCTGGGGGAGGAGCCGCGCCCGGATGTGCTGGAGTTGGAGCTGGTCAACCAGG
CCATCGAGGCCGTGCGCAGTGAGGTGGAGCTGGAGCAGCGGCGCTACCGGGAGCTGCTGGAGACGACCCG
TGAGCACCGCTCCGCCGAGGCCCCCGCCCTGGCGCCCCGCGGCCCCAACGCCAGCCCCACTGTGGGCCCG
GACGAGGATGCCTTCCCACTGGCCTTCGACTACAGCCCCGGCAGCCACGGCCTATTAAGCCCTGATGCCG
GCTACCAGCCCACCCCACTGGCCGCCCCTGCCGAGCCGGGCAGCAAGTACTCGCTGGCGTCCCTGGACAG
GGGTCAGGGCAGAGGTGGAGGGGGTGGCGGTGCCCTGGAATACGTCCCCAAGGCTGTGAGCCAGCCCCGG
CGGCACAGCCGCCCCGTTCCCAGTGGCAAGTACGTGGTGGACAACTCCAGGCCACCCACAGACCTGGAGT
ATGACCCTCTCTCCAACTACTCGGCCCGGCACCTCAGCAGGGCCAGCTCCCGGGATGAGCGGGCCGCCAA
GCGGCCCCGGGGCTCCCGCGGCAGTGAGCCCTACACACCTGCTCCCAAGAAGCTCTGTGACCCCTTTGGC
AGTTGCGATGCAAGGTTCTCAGACTCAGAAGATGAGGCCGCCACGGTCCCAGGTAACGAGCCCACCACGG
CCAGCACCCCCAAAGCCAGGGCCGACCCTGAGATCAAGGCCACCGGGCAGCCACCCTCCAAAGAGGGCCT
GGAGGCCGAGGGGGGCGGCCTGCGGGAGACCAAGGAGACGGCCGTGCAGTGCGACGTGGGGGACCTCCAG
CCGCCCCCAGCCAAGCCCGCCTCCCCAGCCCAGGTCCAGTCCTCACAGGATGGGGGCTGCCCCAAGGAGG
GAAAACCCAAGAAGAAAAAAACCGGGGCCCCACCTGCCCCCAGCTGCAAAGACGGGGCCCAGGGGAAGGA
CAAGACCAAGGACAAGGGCCGAGGGCGGCCTGTGGAGAAGCCCCGTGCGGACAAGAAGGGCCCGCAGGCC
AGCAGCCCCCGGCGCAAGGCAGAGCGGCCGGAAGGGACCAAGAAGAAGCCATCTTCGGCCACTCCTGTGG
CCACCTCAGGGAAAGGGAGGCCTGACCGGCCAGCGCGGCGGCCGAGCCCCACAAGCGGGGACTCCCGACC
GGCGGCCGGCAGAGGCCCACCCCGCCCCCTCCAGCTGCCCGACAGGAAGAGCACCAAGGCCCCGTCGGGG
AAGCTAGTGGAGCGGAAAGCCCGCTCACTAGACGAGGGCGCCTCCCAGGACGCCCCCAAGCTGAAGAAGC
GGGCCCTGAGCCACGCCGACCTCTTTGGGGACGAGAGTGAGGACGAGGCCGCAGGGCCAGGGGTGCCGAG
CGTGTGGCCCTCTGCCCTCCCCAGCCTCAGCTCGGACTCAGACTCCGACTCAGACTCCAGCCTGGGCTTC
CCGGAGGCGCAGGGGCCGCCCAAGCGGCTCAAGGCCTCCCCGCCCCCCTCCCCCGCCCCATCCTCCTCCT
CCTCCTCCTCCTCCTCCACCTCCAGCGCGGGGGCGGATGTGGACTACTCGGCCCTGGAGAAGGAGGTGGA
CTTTGACTCCGACCCCATGGAGGAGTGCCTGCGGATCTTCAACGAGTCCACCAGCGTCAAGACGGAGGAC
AGAGGCCGGCTGGCCCGGCAGCCCCCCAAGGAAGAGAAGAGTGAGGAGAAGGGGCTTTCGGGTCTGACCA
CTCTGTTCCCCGGGCAGAAGAGGAGGATCTCCCACCTTTCCAAGCAAGGCCAGGAGGTGGAGCCCCCGAG
GAGGGGTCCCGCGGTGCCCCCGGCCCGGCCCCCGACGGCGCAGGAGGTGTGCTACCTGCGGGCCCAGCAG
GCGCAGAGGGCATCGGCGAGCTTGCTGCAGGCCCCCGCCAGGCTGGCAGAGAAGTCGCCCTCCGTCCACA
TTTCCGCCCCTGGCGAGAAGAGGAGGATCGCCCACATCCCCAACCCCCGCCTGGCTGCAGCCCCCACAGG
TGCCAAGAGGACCCTTGCGGCCAGCGGCAGCCAGTCCTCCAACGGCCCTGAGCCAGGTGGCCAGCAGCTG
AAAACACGCACATTGTCGGGGATGGCGTCCAAGACTACCACCACCATCATCCCTAAGCGAATCGCCCACA
GTCCATCCTTACAGAGTTTAAAGAAACCCATTATCCCCAAAGAGTTTGGGGGCAAAGTCCCCACCGTCAT
CCGCCAGCGCTATCTCAACCTGTTCATCGAGGAGTGTCTCAAGTTCTGTACCTCCAACCAGGAGGCCATA
GAGAAGGCACTGAACGAGGAGAAGGTGGCCTATGACCGCAGCCCCAGCAAGAACATCTACCTGAATGTGG
CCGTGAACACCCTCAAGAAGCTCAGGGGCCTGGCCCCCAGCGCTGTGCCCGGCCTCAGCAAAACCAGTGG
CCGCAGGGTTGTGTCCCACGAGGTGGTGTTGGGGGGCAGGTTGGCCGCCAAGACCAGCTTCTCGCTCAGC
CGTCCAAGCAGCCCCCGGGTGGAGGACCTGAAAGGGGCTGCCCTGTACAGCCGCCTCAGGGAGTACCTGC
TCACCCAGGACCAGCTCAAGGAGAACGGCTACCCCTTCCCGCACCCAGAGCGGCCCGGGGGCGCAATCAT
CTTCACAGCTGAGGAGAAGAGGCCCAAGGACTCTTCCTGCAGGACCTGCTGCCGCTGTGGCACCGAGTAC
CTCGTGTCCTCTTCAGGCCGCTGCATCCGGGACGAGGAGTGTTATTACCACTGGGGACGGCTGCGCCGGA
ACCGGGTGGCCGGAGGCTGGGAGACCCAGTACATGTGCTGCTCGGCTGCCGCCGGCTCTGTCGGCTGCCA
AGTCGCAAAGCAACACGTGCAGGATGGCCGGAAGGAGCGCCTTGAGGGCTTCGTGAAGACCTTTGAGAAA
GAGCTCTCAGGAGACACCCACCCGGGGATCTACGCCCTGGACTGCGAGATGTCCTACACCACATATGGCC
TGGAGCTGACGCGCGTCACGGTGGTCGACACGGACGTGCACGTGGTTTATGACACCTTCGTGAAGCCTGA
CAACGAGATCGTGGACTACAACACCAGGTTTTCGGGGGTGACGGAGGCTGACCTTGCCGACACAAGTGTC
ACGCTGCGTGACGTCCAGGCCGTTCTGCTGAGCATGTTCAGCGCTGACACCATCCTCATCGGACACAGCC
TGGAGAGCGACCTCCTGGCCCTGAAGGTCATCCACAGCACCGTGGTGGACACGTCTGTGCTCTTCCCCCA
CCGCCTGGGCCTCCCCTACAAGCGGTCCCTGCGGAACCTCATGGCCGACTACCTCAGACAGATCATCCAG
GACAATGTGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTGATCTGGAAGGTTC
GAGAAGACGCCAAGACCAAGCGATGA

Translation (1221 aa):
MLRSTGFFRAIDCPYWSGAPGGPCRRPYCHFRHRGARGSGAPGDGGEAPPAAGLGYDPYNPELPKPPAQR
ENGTLGLGEEPRPDVLELELVNQAIEAVRSEVELEQRRYRELLETTREHRSAEAPALAPRGPNASPTVGP
DEDAFPLAFDYSPGSHGLLSPDAGYQPTPLAAPAEPGSKYSLASLDRGQGRGGGGGGALEYVPKAVSQPR
RHSRPVPSGKYVVDNSRPPTDLEYDPLSNYSARHLSRASSRDERAAKRPRGSRGSEPYTPAPKKLCDPFG
SCDARFSDSEDEAATVPGNEPTTASTPKARADPEIKATGQPPSKEGLEAEGGGLRETKETAVQCDVGDLQ
PPPAKPASPAQVQSSQDGGCPKEGKPKKKKTGAPPAPSCKDGAQGKDKTKDKGRGRPVEKPRADKKGPQA
SSPRRKAERPEGTKKKPSSATPVATSGKGRPDRPARRPSPTSGDSRPAAGRGPPRPLQLPDRKSTKAPSG
KLVERKARSLDEGASQDAPKLKKRALSHADLFGDESEDEAAGPGVPSVWPSALPSLSSDSDSDSDSSLGF
PEAQGPPKRLKASPPPSPAPSSSSSSSSSTSSAGADVDYSALEKEVDFDSDPMEECLRIFNESTSVKTED
RGRLARQPPKEEKSEEKGLSGLTTLFPGQKRRISHLSKQGQEVEPPRRGPAVPPARPPTAQEVCYLRAQQ
AQRASASLLQAPARLAEKSPSVHISAPGEKRRIAHIPNPRLAAAPTGAKRTLAASGSQSSNGPEPGGQQL
KTRTLSGMASKTTTTIIPKRIAHSPSLQSLKKPIIPKEFGGKVPTVIRQRYLNLFIEECLKFCTSNQEAI
EKALNEEKVAYDRSPSKNIYLNVAVNTLKKLRGLAPSAVPGLSKTSGRRVVSHEVVLGGRLAAKTSFSLS
RPSSPRVEDLKGAALYSRLREYLLTQDQLKENGYPFPHPERPGGAIIFTAEEKRPKDSSCRTCCRCGTEY
LVSSSGRCIRDEECYYHWGRLRRNRVAGGWETQYMCCSAAAGSVGCQVAKQHVQDGRKERLEGFVKTFEK
ELSGDTHPGIYALDCEMSYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSV
TLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQ
DNVDGHSSSEDAGACMHLVIWKVREDAKTKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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