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Report for CCDS32216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32216.1 Public Homo sapiens 15 CATSPER2 24 110 108 CCDS HistoryNCBI Gene:117155Re-query CCDS DB by CCDS ID:32216.1Re-query CCDS DB by GeneID:117155See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321596.6 ENSP00000321463.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321596.6Link to Ensembl Protein Viewer:ENSP00000321463.5Re-query CCDS DB by Nucleotide ID:ENST00000321596Re-query CCDS DB by Protein ID:ENSP00000321463
Original member Current member NCBI NM_001282309.3 NP_001269238.1 Accepted alive Link to Nucleotide Sequence:NM_001282309.3Link to Protein Sequence:NP_001269238.1Re-query CCDS DB by Nucleotide ID:NM_001282309Re-query CCDS DB by Protein ID:NP_001269238Link to BLAST:NP_001269238.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269238.1 528 Q96P56-2 528 100% 0 0

Chromosomal Locations for CCDS 32216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43630701 43630732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43632199 43632363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43632717 43632928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43635360 43635416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43635727 43635826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43636041 43636219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43638904 43639028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43639643 43639798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43640324 43640496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43647050 43647118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43647294 43647467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43647917 43648061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1587 nt):
ATGGCCGCTTACCAACAAGAAGAGCAGATGCAGCTTCCCCGAGCTGATGCCATTCGTTCACGTCTCATCG
ATACTTTCTCTCTCATTGAGCATTTGCAAGGCTTGAGCCAAGCTGTGCCGCGGCACACTATCAGGGAGTT
ACTTGATCCTTCCCGCCAGAAGAAACTTGTATTGGGAGATCAACACCAGCTAGTGCGTTTCTCTATAAAG
CCTCAGCGTATAGAACAGATTTCACATGCCCAGAGGCTGTTGAGCAGGCTTCATGTGCGCTGCAGTCAGA
GGCCACCTCTTTCTTTGTGGGCCGGATGGGTCCTTGAGTGTCCTCTCTTCAAAAACTTCATCATCTTCCT
GGTCTTTTTGAATACGATCATATTGATGGTTGAAATAGAATTGCTGGAATCCACAAATACCAAACTATGG
CCATTGAAGCTGACCTTGGAGGTGGCAGCTTGGTTTATCTTGCTTATTTTCATCCTGGAGATCCTTCTTA
AGTGGCTATCCAACTTTTCTGTTTTCTGGAAGAGTGCCTGGAATGTCTTTGACTTTGTTGTTACCATGTT
GTCCCTGCTTCCCGAGGTTGTGGTATTGGTAGGGGTAACAGGCCAATCGGTGTGGCTTCAGCTTCTGAGG
ATCTGCCGGGTGCTGAGGTCTCTCAAACTCCTTGCACAATTCCGTCAAATTCAAATTATTATTTTGGTCC
TGGTCAGGGCCCTCAAGAGCATGACCTTCCTCTTGATGTTGCTGCTCATCTTCTTCTACATTTTTGCTGT
GACTGGTGTCTACGTCTTCTCAGAGTACACCCGTTCACCTCGTCAGGACCTGGAGTACCATGTGTTCTTC
TCGGACCTCCCGAATTCCCTGGTAACAGTGTTCATTCTCTTCACCTTGGATCATTGGTATGCACTGCTTC
AGGACGTCTGGAAGGTGCCTGAAGTCAGTCGCATCTTCAGCAGCATCTATTTCATCCTTTGGTTGTTGCT
TGGCTCCATTATCTTTCGAAGTATCATAGTAGCCATGATGGTTACTAACTTTCAGAATATCAGGAAAGAG
CTGAATGAGGAGATGGCGCGTCGGGAGGTTCAGCTCAAAGCTGACATGTTCAAGCGGCAGATCATCCAGA
GGAGAAAAAACATGTCACATGAAGCACTGACGTCAAGCCATAGCAAAATAGAGGACAGAGGAGCTAGTCA
ACAAAGGGAAAGTTTGGACTTATCAGAAGTGTCTGAAGTAGAGTCTAATTATGGTGCCACTGAAGAGGAT
TTAATAACATCTGCATCAAAAACAGAAGAGACCTTGTCAAAAAAGAGAGAGTACCAGTCTTCCTCCTGTG
TCTCCTCCACATCCTCTTCCTATTCTTCCTCTTCTGAATCCAGATTTTCTGAATCTATTGGTCGTTTGGA
CTGGGAGACTCTTGTGCACGAAAATCTGCCCGGGCTAATGGAAATGGATCAGGATGACCGTGTTTGGCCC
AGAGACTCACTCTTCCGATATTTTGAGTTGCTAGAAAAGCTTCAGTATAACCTAGAGGAACGTAAGAAGT
TACAAGAGTTTGCAGTGCAGGCACTGATGAACTTGGAAGACAAGTAA

Translation (528 aa):
MAAYQQEEQMQLPRADAIRSRLIDTFSLIEHLQGLSQAVPRHTIRELLDPSRQKKLVLGDQHQLVRFSIK
PQRIEQISHAQRLLSRLHVRCSQRPPLSLWAGWVLECPLFKNFIIFLVFLNTIILMVEIELLESTNTKLW
PLKLTLEVAAWFILLIFILEILLKWLSNFSVFWKSAWNVFDFVVTMLSLLPEVVVLVGVTGQSVWLQLLR
ICRVLRSLKLLAQFRQIQIIILVLVRALKSMTFLLMLLLIFFYIFAVTGVYVFSEYTRSPRQDLEYHVFF
SDLPNSLVTVFILFTLDHWYALLQDVWKVPEVSRIFSSIYFILWLLLGSIIFRSIIVAMMVTNFQNIRKE
LNEEMARREVQLKADMFKRQIIQRRKNMSHEALTSSHSKIEDRGASQQRESLDLSEVSEVESNYGATEED
LITSASKTEETLSKKREYQSSSCVSSTSSSYSSSSESRFSESIGRLDWETLVHENLPGLMEMDQDDRVWP
RDSLFRYFELLEKLQYNLEERKKLQEFAVQALMNLEDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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