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Report for CCDS31620.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31620.1 Public Homo sapiens 11 PITPNM1 24 110 108 CCDS HistoryNCBI Gene:9600Re-query CCDS DB by CCDS ID:31620.1Re-query CCDS DB by GeneID:9600See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31620.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356404.8 ENSP00000348772.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356404.8Link to Ensembl Protein Viewer:ENSP00000348772.3Re-query CCDS DB by Nucleotide ID:ENST00000356404Re-query CCDS DB by Protein ID:ENSP00000348772
Original member Current member EBI ENST00000534749.5 ENSP00000437286.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534749.5Link to Ensembl Protein Viewer:ENSP00000437286.1Re-query CCDS DB by Nucleotide ID:ENST00000534749Re-query CCDS DB by Protein ID:ENSP00000437286
Original member Current member NCBI NM_004910.3 NP_004901.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004910.3Link to Protein Sequence:NP_004901.2Re-query CCDS DB by Nucleotide ID:NM_004910Re-query CCDS DB by Protein ID:NP_004901Link to BLAST:NP_004901.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004901.2 1244 O00562-1 1244 100% 0 0

Chromosomal Locations for CCDS 31620.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67492033 67492296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67492934 67493062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67493410 67493593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67493688 67493837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67493922 67494070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67494244 67494360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67494846 67494956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67495077 67495225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67495438 67495602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67496178 67496348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67497231 67497436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67497522 67497679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67497917 67498024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67498133 67498322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67498596 67498846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67498940 67499001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67499723 67499830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67499914 67500009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67500095 67500421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67501862 67502086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67502292 67502413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67502504 67502718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67504103 67504180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3735 nt):
ATGCTCATCAAGGAATACCACATTCTGCTGCCCATGAGCCTGGACGAGTACCAGGTGGCCCAGCTCTACA
TGATCCAGAAAAAGAGCCGGGAGGAGTCTAGTGGTGAGGGCAGCGGCGTGGAGATCCTGGCCAACCGGCC
CTACACGGATGGGCCCGGGGGCAGCGGGCAATACACACACAAGGTGTACCACGTGGGCTCCCACATCCCA
GGCTGGTTCCGGGCACTGCTGCCCAAGGCTGCCCTGCAGGTAGAAGAGGAATCCTGGAATGCCTACCCCT
ACACCCGAACCCGGTACACCTGCCCTTTCGTGGAGAAATTCTCCATTGAAATTGAGACCTATTACCTGCC
TGATGGGGGGCAGCAGCCAAACGTCTTCAACCTGAGCGGGGCCGAGAGGAGACAGCGCATCCTGGACACC
ATCGACATCGTGCGGGATGCAGTGGCCCCAGGCGAGTACAAAGCAGAAGAGGACCCCCGGCTTTATCACT
CGGTCAAGACGGGCCGAGGGCCACTGTCTGATGACTGGGCACGGACGGCGGCACAGACGGGGCCCCTTAT
GTGTGCCTATAAGCTGTGCAAGGTTGAGTTCCGCTACTGGGGCATGCAAGCCAAGATCGAGCAGTTCATC
CATGATGTAGGTCTGCGTCGGGTGATGCTGCGGGCCCACCGCCAGGCCTGGTGCTGGCAGGATGAGTGGA
CAGAGCTGAGCATGGCTGACATCCGGGCACTGGAAGAGGAGACTGCTCGCATGCTGGCCCAGCGCATGGC
CAAGTGCAACACAGGCAGTGAGGGGTCCGAGGCCCAGCCCCCCGGGAAACCGAGCACCGAGGCCCGGTCT
GCGGCCAGCAACACTGGCACCCCCGATGGGCCTGAGGCCCCCCCAGGCCCAGATGCCTCCCCCGATGCCA
GCTTTGGGAAGCAGTGGTCCTCATCCTCCCGTTCCTCCTACTCATCCCAACATGGAGGGGCTGTGTCTCC
CCAGAGCTTGTCTGAGTGGCGCATGCAGAACATTGCCCGAGACTCTGAGAACAGCTCCGAGGAAGAGTTC
TTTGATGCCCACGAAGGCTTCTCGGACAGTGAGGAGGTCTTCCCCAAGGAGATGACCAAGTGGAACTCCA
ATGACTTCATTGATGCCTTTGCCTCCCCAGTGGAGGCAGAGGGAACGCCAGAGCCTGGAGCCGAGGCAGC
TAAAGGCATTGAGGATGGGGCCCAAGCACCCAGGGACTCAGAGGGCCTGGATGGAGCCGGGGAGCTGGGG
GCTGAGGCATGCGCAGTCCACGCCCTCTTCCTTATCCTGCACAGCGGCAACATCCTGGACTCAGGCCCTG
GAGACGCCAACTCCAAGCAGGCGGATGTGCAGACGCTGAGCTCCGCCTTCGAGGCCGTCACCCGCATCCA
CTTCCCTGAGGCCTTGGGCCACGTGGCGCTGCGACTGGTGCCCTGTCCACCCATCTGCGCCGCCGCCTAT
GCCCTTGTCTCCAACCTGAGCCCTTACAGCCACGATGGGGACAGCCTGTCTCGCTCCCAAGACCACATTC
CACTGGCTGCCCTGCCACTGCTGGCCACCTCATCCTCCCGCTACCAGGGCGCCGTGGCCACCGTCATTGC
CCGCACCAACCAGGCCTACTCAGCCTTCCTGCGCTCACCTGAGGGTGCCGGCTTCTGTGGGCAGGTCGCA
CTGATTGGAGATGGTGTTGGTGGCATCCTGGGCTTTGATGCACTCTGCCACAGTGCTAACGCGGGCACCG
GGAGTCGGGGCAGCAGCCGCCGTGGGAGCATGAACAATGAGCTGCTCTCTCCGGAGTTTGGCCCAGTGCG
GGACCCCCTGGCAGATGGTGTGGAAGGCCTGGGTCGGGGCAGCCCAGAACCCTCGGCCTTGCCTCCCCAG
CGCATCCCCAGCGACATGGCCAGTCCTGAGCCCGAGGGCTCTCAGAACAGCCTTCAGGCAGCCCCCGCAA
CCACCTCCTCCTGGGAGCCCCGGCGGGCAAGCACGGCCTTCTGCCCACCCGCTGCCAGTTCCGAGGCACC
TGACGGCCCCAGCAGCACTGCCCGCCTTGACTTCAAGGTCTCTGGCTTCTTCCTCTTCGGCTCCCCACTG
GGCCTGGTGCTGGCTCTGCGCAAAACTGTGATGCCCGCCCTGGAGGCAGCCCAGATGCGCCCAGCCTGTG
AACAGATCTACAACCTCTTCCACGCGGCTGACCCCTGCGCCTCACGCCTCGAGCCCCTGCTGGCCCCGAA
GTTCCAGGCCATCGCCCCACTGACCGTGCCCCGCTACCAGAAGTTCCCCCTGGGAGATGGCTCATCCCTG
CTGCTGGCCGACACTCTGCAGACGCACTCCAGCCTCTTTCTGGAGGAGCTGGAGATGCTGGTGCCCTCAA
CACCCACCTCTACTAGCGGTGCCTTCTGGAAGGGCAGTGAGTTGGCCACTGACCCCCCGGCCCAGCCAGC
CGCCCCCAGCACCACCAGTGAGGTGGTTAAGATCCTGGAGCGCTGGTGGGGGACCAAGCGGATCGACTAC
TCGCTGTACTGCCCCGAGGCGCTCACCGCCTTTCCCACCGTCACGCTGCCCCACCTCTTCCACGCCAGCT
ACTGGGAGTCCGCCGACGTGGTGGCGTTCATCCTGCGCCAGGTGATCGAGAAGGAGCGGCCACAGCTGGC
GGAATGCGAGGAGCCGTCCATCTACAGCCCGGCCTTCCCCAGGGAGAAGTGGCAGCGAAAACGCACGCAG
GTCAAGATCCGGAACGTCACTTCCAACCACCGGGCGAGCGACACGGTGGTGTGCGAGGGCCGCCCCCAGG
TGCTAAGCGGGCGCTTCATGTACGGGCCCCTGGACGTCGTCACGCTCACTGGAGAGAAGGTGGATGTCTA
CATCATGACGCAGCCGCTGTCGGGCAAGTGGATCCACTTTGGCACCGAAGTCACCAATAGCTCGGGCCGC
CTCACCTTCCCAGTTCCCCCAGAACGCGCGCTGGGCATTGGTGTCTACCCCGTGCGCATGGTGGTCAGGG
GCGACCACACCTATGCCGAATGCTGCCTGACTGTGGTGGCCCGCGGCACGGAGGCTGTGGTCTTCAGCAT
CGACGGCTCCTTCACCGCCAGCGTCTCCATCATGGGCAGCGACCCCAAGGTGCGAGCTGGCGCCGTGGAC
GTGGTCAGGCACTGGCAGGACTCCGGCTACCTGATCGTGTATGTCACAGGCCGGCCGGATATGCAGAAGC
ACCGCGTGGTGGCATGGCTGTCGCAGCACAACTTCCCCCACGGCGTCGTCTCCTTCTGCGACGGCCTCAC
CCACGACCCACTACGCCAGAAGGCAATGTTTCTGCAGAGCCTGGTGCAGGAGGTAGAACTGAACATCGTG
GCCGGTTATGGGTCTCCCAAAGATGTGGCTGTATACGCGGCGCTGGGGCTGTCCCCGAGCCAGACCTACA
TCGTGGGCCGTGCCGTGCGGAAGCTACAGGCGCAGTGCCAGTTCCTGTCAGACGGCTATGTGGCCCACCT
GGGCCAGCTGGAAGCGGGCTCGCACTCGCATGCCTCCTCGGGACCCCCGAGAGCTGCCTTGGGCAAGAGC
AGCTATGGTGTGGCTGCCCCCGTGGACTTCCTGCGCAAACAGAGCCAGCTGCTTCGCTCGAGGGGCCCCA
GCCAGGCGGAGCGTGAGGGCCCGGGAACACCACCCACCACCCTGGCACGGGGCAAAGCACGGAGCATCAG
CCTGAAGCTGGACAGCGAGGAGTGA

Translation (1244 aa):
MLIKEYHILLPMSLDEYQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGPGGSGQYTHKVYHVGSHIP
GWFRALLPKAALQVEEESWNAYPYTRTRYTCPFVEKFSIEIETYYLPDGGQQPNVFNLSGAERRQRILDT
IDIVRDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWARTAAQTGPLMCAYKLCKVEFRYWGMQAKIEQFI
HDVGLRRVMLRAHRQAWCWQDEWTELSMADIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPSTEARS
AASNTGTPDGPEAPPGPDASPDASFGKQWSSSSRSSYSSQHGGAVSPQSLSEWRMQNIARDSENSSEEEF
FDAHEGFSDSEEVFPKEMTKWNSNDFIDAFASPVEAEGTPEPGAEAAKGIEDGAQAPRDSEGLDGAGELG
AEACAVHALFLILHSGNILDSGPGDANSKQADVQTLSSAFEAVTRIHFPEALGHVALRLVPCPPICAAAY
ALVSNLSPYSHDGDSLSRSQDHIPLAALPLLATSSSRYQGAVATVIARTNQAYSAFLRSPEGAGFCGQVA
LIGDGVGGILGFDALCHSANAGTGSRGSSRRGSMNNELLSPEFGPVRDPLADGVEGLGRGSPEPSALPPQ
RIPSDMASPEPEGSQNSLQAAPATTSSWEPRRASTAFCPPAASSEAPDGPSSTARLDFKVSGFFLFGSPL
GLVLALRKTVMPALEAAQMRPACEQIYNLFHAADPCASRLEPLLAPKFQAIAPLTVPRYQKFPLGDGSSL
LLADTLQTHSSLFLEELEMLVPSTPTSTSGAFWKGSELATDPPAQPAAPSTTSEVVKILERWWGTKRIDY
SLYCPEALTAFPTVTLPHLFHASYWESADVVAFILRQVIEKERPQLAECEEPSIYSPAFPREKWQRKRTQ
VKIRNVTSNHRASDTVVCEGRPQVLSGRFMYGPLDVVTLTGEKVDVYIMTQPLSGKWIHFGTEVTNSSGR
LTFPVPPERALGIGVYPVRMVVRGDHTYAECCLTVVARGTEAVVFSIDGSFTASVSIMGSDPKVRAGAVD
VVRHWQDSGYLIVYVTGRPDMQKHRVVAWLSQHNFPHGVVSFCDGLTHDPLRQKAMFLQSLVQEVELNIV
AGYGSPKDVAVYAALGLSPSQTYIVGRAVRKLQAQCQFLSDGYVAHLGQLEAGSHSHASSGPPRAALGKS
SYGVAAPVDFLRKQSQLLRSRGPSQAEREGPGTPPTTLARGKARSISLKLDSEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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