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Report for CCDS31098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31098.1 Public Homo sapiens 1 OR11L1 24 110 108 CCDS HistoryNCBI Gene:391189Re-query CCDS DB by CCDS ID:31098.1Re-query CCDS DB by GeneID:391189See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31098.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355784.3 ENSP00000348033.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355784.3Link to Ensembl Protein Viewer:ENSP00000348033.2Re-query CCDS DB by Nucleotide ID:ENST00000355784Re-query CCDS DB by Protein ID:ENSP00000348033
Original member Current member NCBI NM_001001959.1 NP_001001959.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001959.1Link to Protein Sequence:NP_001001959.1Re-query CCDS DB by Nucleotide ID:NM_001001959Re-query CCDS DB by Protein ID:NP_001001959Link to BLAST:NP_001001959.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001959.1 322 Q8NGX0 322 100% 0 0

Chromosomal Locations for CCDS 31098.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247840928 247841896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGGAGCCCCAAAATACCTCCACTGTGACTAACTTTCAGCTGTTAGGATTCCAGAACCTTCTTGAATGGC
AGGCCCTGCTCTTTGTCATTTTCCTGCTCATCTACTGCCTGACCATTATAGGGAATGTTGTCATCATCAC
CGTGGTGAGCCAGGGCCTGCGACTGCACTCCCCTATGTACATGTTCCTCCAGCATCTCTCCTTTCTGGAG
GTCTGGTACACGTCCACCACTGTGCCCCTTCTCCTAGCCAACCTGCTGTCCTGGGGCCAAGCCATCTCCT
TCTCTGCCTGCATGGCACAGCTCTACTTCTTCGTATTCCTCGGCGCCACCGAGTGCTTTCTCCTGGCCTT
CATGGCCTATGACCGTTACCTGGCCATCTGCAGCCCACTCCGCTACCCCTTCCTCATGCATCGTGGGCTC
TGTGCCAGGTTGGTGGTGGTCTCCTGGTGCACAGGGGTCAGCACAGGCTTTCTGCCTTCCCTGATGATTT
CCAGGTTGGACTTCTGTGGGCGCAATCAGATTAACCATTTCTTCTGCGACCTCCCGCCACTCATGCAGCT
CTCCTGTTCCAGAGTTTATATCACCGAGGTGACCATCTTCATCCTGTCAATTGCCGTGCTGTGCATTTGT
TTTTTTCTGACACTGGGGCCCTATGTTTTCATTGTGTCCTCCATATTGAGAATCCCTTCCACCTCTGGCC
GGAGAAAGACCTTTTCCACATGTGGCTCCCACCTGGCTGTTGTCACTCTCTACTACGGGACCATGATCTC
CATGTATGTGTGTCCCAGTCCCCACCTGTTGCCTGAAATCAACAAGATCATTTCTGTCTTCTACACTGTG
GTCACACCACTGCTGAACCCAGTTATCTACAGCTTGAGGAACAAAGACTTCAAAGAAGCTGTTAGAAAGG
TCATGAGAAGGAAATGTGGTATTCTATGGAGTACAAGTAAAAGGAAGTTCCTTTATTAG

Translation (322 aa):
MEPQNTSTVTNFQLLGFQNLLEWQALLFVIFLLIYCLTIIGNVVIITVVSQGLRLHSPMYMFLQHLSFLE
VWYTSTTVPLLLANLLSWGQAISFSACMAQLYFFVFLGATECFLLAFMAYDRYLAICSPLRYPFLMHRGL
CARLVVVSWCTGVSTGFLPSLMISRLDFCGRNQINHFFCDLPPLMQLSCSRVYITEVTIFILSIAVLCIC
FFLTLGPYVFIVSSILRIPSTSGRRKTFSTCGSHLAVVTLYYGTMISMYVCPSPHLLPEINKIISVFYTV
VTPLLNPVIYSLRNKDFKEAVRKVMRRKCGILWSTSKRKFLY


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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