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Report for CCDS2622.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2622.1 Public Homo sapiens 3 MRPS25 24 110 108 CCDS HistoryNCBI Gene:64432Re-query CCDS DB by CCDS ID:2622.1Re-query CCDS DB by GeneID:64432See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2622.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253686.7 ENSP00000253686.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253686.7Link to Ensembl Protein Viewer:ENSP00000253686.2Re-query CCDS DB by Nucleotide ID:ENST00000253686Re-query CCDS DB by Protein ID:ENSP00000253686
Original member Current member EBI ENST00000695334.2 ENSP00000511812.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695334.2Link to Ensembl Protein Viewer:ENSP00000511812.1Re-query CCDS DB by Nucleotide ID:ENST00000695334Re-query CCDS DB by Protein ID:ENSP00000511812
Original member Current member EBI ENST00000695376.1 ENSP00000511849.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695376.1Link to Ensembl Protein Viewer:ENSP00000511849.1Re-query CCDS DB by Nucleotide ID:ENST00000695376Re-query CCDS DB by Protein ID:ENSP00000511849
Original member Current member EBI ENST00000695379.1 ENSP00000511852.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695379.1Link to Ensembl Protein Viewer:ENSP00000511852.1Re-query CCDS DB by Nucleotide ID:ENST00000695379Re-query CCDS DB by Protein ID:ENSP00000511852
Original member Current member EBI ENST00000695380.2 ENSP00000511853.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695380.2Link to Ensembl Protein Viewer:ENSP00000511853.1Re-query CCDS DB by Nucleotide ID:ENST00000695380Re-query CCDS DB by Protein ID:ENSP00000511853
Original member Current member EBI ENST00000695382.1 ENSP00000511855.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695382.1Link to Ensembl Protein Viewer:ENSP00000511855.1Re-query CCDS DB by Nucleotide ID:ENST00000695382Re-query CCDS DB by Protein ID:ENSP00000511855
Original member Current member EBI ENST00000496484.3 ENSP00000511856.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000496484.3Link to Ensembl Protein Viewer:ENSP00000511856.1Re-query CCDS DB by Nucleotide ID:ENST00000496484Re-query CCDS DB by Protein ID:ENSP00000511856
Original member Current member EBI ENST00000474866.3 ENSP00000511860.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000474866.3Link to Ensembl Protein Viewer:ENSP00000511860.1Re-query CCDS DB by Nucleotide ID:ENST00000474866Re-query CCDS DB by Protein ID:ENSP00000511860
Original member Current member EBI ENST00000695386.1 ENSP00000511862.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695386.1Link to Ensembl Protein Viewer:ENSP00000511862.1Re-query CCDS DB by Nucleotide ID:ENST00000695386Re-query CCDS DB by Protein ID:ENSP00000511862
Original member Current member EBI ENST00000695387.1 ENSP00000511863.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695387.1Link to Ensembl Protein Viewer:ENSP00000511863.1Re-query CCDS DB by Nucleotide ID:ENST00000695387Re-query CCDS DB by Protein ID:ENSP00000511863
Original member Current member EBI ENST00000695391.1 ENSP00000511867.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695391.1Link to Ensembl Protein Viewer:ENSP00000511867.1Re-query CCDS DB by Nucleotide ID:ENST00000695391Re-query CCDS DB by Protein ID:ENSP00000511867
Original member Current member EBI ENST00000695392.1 ENSP00000511868.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695392.1Link to Ensembl Protein Viewer:ENSP00000511868.1Re-query CCDS DB by Nucleotide ID:ENST00000695392Re-query CCDS DB by Protein ID:ENSP00000511868
Original member Current member EBI ENST00000695394.1 ENSP00000511870.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695394.1Link to Ensembl Protein Viewer:ENSP00000511870.1Re-query CCDS DB by Nucleotide ID:ENST00000695394Re-query CCDS DB by Protein ID:ENSP00000511870
Original member Current member EBI ENST00000698782.1 ENSP00000513929.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698782.1Link to Ensembl Protein Viewer:ENSP00000513929.1Re-query CCDS DB by Nucleotide ID:ENST00000698782Re-query CCDS DB by Protein ID:ENSP00000513929
Original member Current member EBI ENST00000698783.1 ENSP00000513930.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698783.1Link to Ensembl Protein Viewer:ENSP00000513930.1Re-query CCDS DB by Nucleotide ID:ENST00000698783Re-query CCDS DB by Protein ID:ENSP00000513930
Original member Current member NCBI NM_022497.5 NP_071942.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022497.5Link to Protein Sequence:NP_071942.1Re-query CCDS DB by Nucleotide ID:NM_022497Re-query CCDS DB by Protein ID:NP_071942Link to BLAST:NP_071942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071942.1 173 P82663-1 173 100% 0 0

Chromosomal Locations for CCDS 2622.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 15052441 15052633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 15053380 15053467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 15059369 15059475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 15065061 15065194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGCCCATGAAGGGCCGCTTCCCCATCCGCCGCACCCTGCAATATCTGAGCCAGGGGAACGTGGTGTTCA
AGGACTCCGTGAAGGTCATGACAGTGAATTACAACACGCATGGGGAGCTGGGCGAGGGCGCCAGGAAGTT
TGTGTTTTTCAACATACCTCAGATTCAATACAAAAACCCTTGGGTGCAGATCATGATGTTTAAGAACATG
ACGCCGTCACCCTTCCTGCGATTCTACTTAGATTCTGGGGAGCAGGTCCTGGTGGATGTGGAGACCAAGA
GCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGGGAAGAATGAGGAAACCCTCAGGGAAGAGGA
GGAGGAGAAAAAGCAGCTTTCTCACCCAGCCAACTTCGGCCCTCGAAAGTACTGCCTGCGGGAGTGCATC
TGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCCTGGTGCCATTACCCAAGGAGATGAGGGGGAAGTACA
AAGCCGCTCTGAAAGCCGATGCCCAGGACTAA

Translation (173 aa):
MPMKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQIMMFKNM
TPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEEKKQLSHPANFGPRKYCLRECI
CEVEGQVPCPSLVPLPKEMRGKYKAALKADAQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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