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Report for CCDS2375.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2375.1 Public Homo sapiens 2 CREB1 24 110 108 CCDS HistoryNCBI Gene:1385Re-query CCDS DB by CCDS ID:2375.1Re-query CCDS DB by GeneID:1385See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2375.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432329.6 ENSP00000387699.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432329.6Link to Ensembl Protein Viewer:ENSP00000387699.2Re-query CCDS DB by Nucleotide ID:ENST00000432329Re-query CCDS DB by Protein ID:ENSP00000387699
Original member Current member NCBI NM_001371426.1 NP_001358355.1 Accepted alive Link to Nucleotide Sequence:NM_001371426.1Link to Protein Sequence:NP_001358355.1Re-query CCDS DB by Nucleotide ID:NM_001371426Re-query CCDS DB by Protein ID:NP_001358355Link to BLAST:NP_001358355.1
Original member Current member NCBI NM_134442.5 NP_604391.1 Accepted alive Link to Nucleotide Sequence:NM_134442.5Link to Protein Sequence:NP_604391.1Re-query CCDS DB by Nucleotide ID:NM_134442Re-query CCDS DB by Protein ID:NP_604391Link to BLAST:NP_604391.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001358355.1 341 P16220-1 341 100% 0 0
NP_604391.1 341 P16220-1 341 100% 0 0

Chromosomal Locations for CCDS 2375.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 207555636 207555749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207560226 207560372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207561119 207561160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207567463 207567563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207570179 207570321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207575272 207575454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207577505 207577655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207596914 207597058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGACCATGGAATCTGGAGCCGAGAACCAGCAGAGTGGAGATGCAGCTGTAACAGAAGCTGAAAACCAAC
AA
ATGACAGTTCAAGCCCAGCCACAGATTGCCACATTAGCCCAGGTATCTATGCCAGCAGCTCATGCAAC
A
TCATCTGCTCCCACCGTAACTCTAGTACAGCTGCCCAATGGGCAGACAGTTCAAGTCCATGGAGTCATT
CAG
GCGGCCCAGCCATCAGTTATTCAGTCTCCACAAGTCCAAACAGTTCAGTCTTCCTGTAAGGACTTAA
AA
AGACTTTTCTCCGGAACACAGATTTCAACTATTGCAGAAAGTGAAGATTCACAGGAGTCAGTGGATAG
T
GTAACTGATTCCCAAAAGCGAAGGGAAATTCTTTCAAGGAGGCCTTCCTACAGGAAAATTTTGAATGAC
TTA
TCTTCTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAGAAGTCTGAAGAGGAGACTTCAGCACCTG
CC
ATCACCACTGTAACGGTGCCAACTCCAATTTACCAAACTAGCAGTGGACAGTATATTGCCATTACCCA
G
GGAGGAGCAATACAGCTGGCTAACAATGGTACCGATGGGGTACAGGGCCTGCAAACATTAACCATGACC
AAT
GCAGCAGCCACTCAGCCGGGTACTACCATTCTACAGTATGCACAGACCACTGATGGACAGCAGATCT
TA
GTGCCCAGCAACCAAGTTGTTGTTCAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGC
A
CCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCCTACACAGCCTGCTGAA
GAA
GCAGCACGAAAGAGAGAGGTCCGTCTAATGAAGAACAGGGAAGCAGCTCGAGAGTGTCGTAGAAAGA
AG
AAAGAATATGTGAAATGTTTAGAAAACAGAGTGGCAGTGCTTGAAAATCAAAACAAGACATTGATTGA
G
GAGCTAAAAGCACTTAAGGACCTTTACTGCCACAAATCAGATTAA


Translation (341 aa):
MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPNGQTVQVHGVI
Q
AAQPSVIQSPQVQTVQ
SSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILND
L
SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQY
IAITQGGAIQLANNGTDGVQGLQTLTMT
N
AAATQPGTTILQYAQTTDGQQILVPSNQVVVQ
AASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAE
E
AARKREVRLMKN
REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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