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Report for CCDS1477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1477.1 Public Homo sapiens 1 C4BPA 24 110 108 CCDS HistoryNCBI Gene:722Re-query CCDS DB by CCDS ID:1477.1Re-query CCDS DB by GeneID:722See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1477.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367070.8 ENSP00000356037.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367070.8Link to Ensembl Protein Viewer:ENSP00000356037.3Re-query CCDS DB by Nucleotide ID:ENST00000367070Re-query CCDS DB by Protein ID:ENSP00000356037
Original member Current member NCBI NM_000715.4 NP_000706.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000715.4Link to Protein Sequence:NP_000706.1Re-query CCDS DB by Nucleotide ID:NM_000715Re-query CCDS DB by Protein ID:NP_000706Link to BLAST:NP_000706.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000706.1 597 P04003 597 100% 0 0

Chromosomal Locations for CCDS 1477.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 207113026 207113167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207114100 207114285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207115416 207115515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207123922 207124007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207124175 207124366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207126713 207126895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207131546 207131740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207134404 207134592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207141106 207141276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207143818 207143993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 207144544 207144717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1794 nt):
ATGCACCCCCCAAAAACTCCATCTGGGGCTCTTCATAGAAAAAGGAAAATGGCAGCCTGGCCCTTCTCCA
GGCTGTGGAAAGTCTCTGATCCAATTCTCTTCCAAATGACCTTGATCGCTGCTCTGTTGCCTGCTGTTCT
TGGCAATTGTGGTCCTCCACCCACTTTATCATTTGCTGCCCCGATGGATATTACGTTGACTGAGACACGC
TTCAAAACTGGAACTACTCTGAAATACACCTGCCTCCCTGGCTACGTCAGATCCCATTCAACTCAGACGC
TTACCTGTAATTCTGATGGCGAATGGGTGTATAACACCTTCTGTATCTACAAACGATGCAGACACCCAGG
AGAGTTACGTAATGGGCAAGTAGAGATTAAGACAGATTTATCTTTTGGATCACAAATAGAATTCAGCTGT
TCAGAAGGATTTTTCTTAATTGGCTCAACCACTAGTCGTTGTGAAGTCCAAGATAGAGGAGTTGGCTGGA
GTCATCCTCTCCCACAATGTGAAATTGTCAAGTGTAAGCCTCCTCCAGACATCAGGAATGGAAGGCACAG
CGGTGAAGAAAATTTCTACGCATACGGCTTTTCTGTCACCTACAGCTGTGACCCCCGCTTCTCACTCTTG
GGCCATGCCTCCATTTCTTGCACTGTGGAGAATGAAACAATAGGTGTTTGGAGACCAAGCCCTCCTACCT
GTGAAAAAATCACCTGTCGCAAGCCAGATGTTTCACATGGGGAAATGGTCTCTGGATTTGGACCCATCTA
TAATTACAAAGACACTATTGTGTTTAAGTGCCAAAAAGGTTTTGTTCTCAGAGGCAGCAGTGTAATTCAT
TGTGATGCTGATAGCAAATGGAATCCTTCTCCTCCTGCTTGTGAGCCCAATAGTTGTATTAATTTACCAG
ACATTCCACATGCTTCCTGGGAAACATATCCTAGGCCGACAAAAGAGGATGTGTATGTTGTTGGGACTGT
GTTAAGGTACCGCTGTCATCCTGGCTACAAACCCACTACAGATGAGCCTACGACTGTGATTTGTCAGAAA
AATTTGAGATGGACCCCATACCAAGGATGTGAGGCGTTATGTTGCCCTGAACCAAAGCTAAATAATGGTG
AAATCACTCAACACAGGAAAAGTCGTCCTGCCAATCACTGTGTTTATTTCTATGGAGATGAGATTTCATT
TTCATGTCATGAGACCAGTAGGTTTTCAGCTATATGCCAAGGAGATGGCACGTGGAGTCCCCGAACACCA
TCATGTGGAGACATTTGCAATTTTCCTCCTAAAATTGCCCATGGGCATTATAAACAATCTAGTTCATACA
GCTTTTTCAAAGAAGAGATTATATATGAATGTGATAAAGGCTACATTCTGGTCGGACAGGCGAAACTCTC
CTGCAGTTATTCACACTGGTCAGCTCCAGCCCCTCAATGTAAAGCTCTGTGTCGGAAACCAGAATTAGTG
AATGGAAGGTTGTCTGTGGATAAGGATCAGTATGTTGAGCCTGAAAATGTCACCATCCAATGTGATTCTG
GCTATGGTGTGGTTGGTCCCCAAAGTATCACTTGCTCTGGGAACAGAACCTGGTACCCAGAGGTGCCCAA
GTGTGAGTGGGAGACCCCCGAAGGCTGTGAACAAGTGCTCACAGGCAAAAGACTCATGCAGTGTCTCCCA
AACCCAGAGGATGTGAAAATGGCCCTGGAGGTATATAAGCTGTCTCTGGAAATTGAACAACTGGAACTAC
AGAGAGACAGCGCAAGACAATCCACTTTGGATAAAGAACTATAA

Translation (597 aa):
MHPPKTPSGALHRKRKMAAWPFSRLWKVSDPILFQMTLIAALLPAVLGNCGPPPTLSFAAPMDITLTETR
FKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYNTFCIYKRCRHPGELRNGQVEIKTDLSFGSQIEFSC
SEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEIVKCKPPPDIRNGRHSGEENFYAYGFSVTYSCDPRFSLL
GHASISCTVENETIGVWRPSPPTCEKITCRKPDVSHGEMVSGFGPIYNYKDTIVFKCQKGFVLRGSSVIH
CDADSKWNPSPPACEPNSCINLPDIPHASWETYPRPTKEDVYVVGTVLRYRCHPGYKPTTDEPTTVICQK
NLRWTPYQGCEALCCPEPKLNNGEITQHRKSRPANHCVYFYGDEISFSCHETSRFSAICQGDGTWSPRTP
SCGDICNFPPKIAHGHYKQSSSYSFFKEEIIYECDKGYILVGQAKLSCSYSHWSAPAPQCKALCRKPELV
NGRLSVDKDQYVEPENVTIQCDSGYGVVGPQSITCSGNRTWYPEVPKCEWETPEGCEQVLTGKRLMQCLP
NPEDVKMALEVYKLSLEIEQLELQRDSARQSTLDKEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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