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Report for CCDS14532.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14532.2 Public Homo sapiens X MID2 24 110 108 CCDS HistoryNCBI Gene:11043Re-query CCDS DB by CCDS ID:14532.2Re-query CCDS DB by GeneID:11043See the combined annotation on chromosome X in Sequence Viewer

Public Note for CCDS 14532.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14532.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262843.11 ENSP00000262843.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262843.11Link to Ensembl Protein Viewer:ENSP00000262843.6Re-query CCDS DB by Nucleotide ID:ENST00000262843Re-query CCDS DB by Protein ID:ENSP00000262843
Original member Current member NCBI NM_012216.4 NP_036348.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012216.4Link to Protein Sequence:NP_036348.2Re-query CCDS DB by Nucleotide ID:NM_012216Re-query CCDS DB by Protein ID:NP_036348Link to BLAST:NP_036348.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036348.2 735 Q9UJV3-1 735 100% 0 0

Chromosomal Locations for CCDS 14532.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107826427 107826430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107840670 107841385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107854609 107854704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107903958 107904065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107905478 107905626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107916002 107916129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107917506 107917739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107924343 107924504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107926094 107926301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107926671 107927073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2208 nt):
ATGGGTGAAAGCCCAGCCTCCGTGGTTCTTAATGCCTCAGGAGGACTATTTTCACTAAAGATGGAAACAC
TGGAGTCTGAATTGACCTGTCCAATCTGCCTAGAGTTGTTTGAAGACCCCCTTCTGCTCCCTTGTGCTCA
CAGCCTCTGCTTCAGCTGTGCCCATCGCATTTTGGTATCAAGCTGCAGCTCTGGTGAATCCATTGAACCC
ATTACTGCTTTCCAGTGTCCTACCTGCAGGTATGTTATCTCGCTGAACCACCGGGGCCTGGATGGCCTCA
AGAGGAATGTGACTCTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAATTCCCC
TAGTGAGAGCCGCCGGGAAAGGACTTACAGGCCCACCACTGCCATGTCTAGCGAGCGAATTGCTTGCCAA
TTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAAACATGCATCACCTGTGAGGTCTCCTACTGTGACC
GTTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACCAGTGCCAGA
CACACATCTTCGAGGGATCACCTGCCTGGACCATGAGAATGAGAAAGTGAACATGTACTGTGTATCTGAT
GACCAATTGATCTGTGCCTTATGCAAACTGGTGGGTCGTCACCGAGACCATCAGGTCGCATCCCTGAATG
ATCGATTTGAGAAACTCAAGCAAACTCTGGAGATGAACCTCACCAACCTGGTTAAGCGCAACAGCGAACT
AGAAAATCAAATGGCCAAACTAATACAGATCTGCCAGCAGGTTGAGGTGAATACTGCTATGCATGAGGCA
AAACTTATGGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAA
TCAAAGAGACAAAGGTTATGAAACTGAGAAAGTTGGCACAGCAGGTTGCTAATTGCCGCCAGTGTCTTGA
ACGGTCAACAGTCCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAATGACCAGGCACGGTTTCTACAG
TCTGCAAAAAATATTGCTGAGAGGGTCGCTATGGCAACTGCATCTTCTCAAGTTCTGATTCCAGACATCA
ATTTTAATGATGCCTTTGAAAACTTTGCTTTAGATTTTTCCAGAGAAAAGAAACTGCTAGAGGGGTTAGA
TTATTTAACAGCCCCAAACCCACCATCTATCCGAGAAGAACTCTGTACTGCCTCCCATGACACCATTACA
GTCCACTGGATCTCGGATGATGAGTTCAGCATCAGCTCCTATGAGCTTCAGTACACCATATTCACTGGCC
AGGCTAACTTCATCAGTAAGTCATGGTGTAGTTGGGGCCTGTGGCCAGAGATAAGGAAATGTAAGGAAGC
AGTAAGCTGCTCAAGATTGGCCGGGGCGCCACGAGGCCTGTATAATTCAGTAGACAGCTGGATGATTGTT
CCCAACATTAAACAGAACCATTACACAGTGCATGGACTCCAGAGCGGGACTCGCTACATCTTCATCGTTA
AAGCCATAAACCAAGCCGGCAGCCGGAACAGTGAACCTACCCGACTAAAAACAAACAGCCAACCCTTTAA
ATTGGATCCCAAAATGACTCACAAGAAGTTGAAGATCTCCAATGATGGATTGCAGATGGAGAAGGATGAA
AGCTCTCTAAAGAAGAGCCACACCCCAGAGAGGTTTAGTGGCACAGGGTGCTATGGGGCAGCAGGAAATA
TATTCATTGACAGTGGCTGCCACTATTGGGAGGTGGTCATGGGTTCCTCAACATGGTATGCAATTGGCAT
TGCCTACAAATCAGCTCCAAAGAATGAATGGATTGGCAAGAATGCCTCCTCATGGGTCTTCTCTCGCTGC
AATAGTAACTTCGTGGTGAGACACAACAACAAGGAAATGCTGGTGGATGTGCCCCCACACCTGAAGCGTC
TGGGTGTCCTCCTGGATTATGACAACAATATGCTGTCTTTCTATGACCCAGCTAACTCTCTCCATCTTCA
TACTTTTGATGTGACCTTCATTCTTCCAGTTTGTCCAACATTTACAATCTGGAACAAATCCCTAATGATC
CTGTCTGGCTTGCCTGCCCCAGATTTTATTGATTACCCTGAGCGGCAGGAATGCAACTGCAGGCCTCAAG
AATCCCCTTATGTTTCTGGGATGAAAACCTGTCATTAA

Translation (735 aa):
MGESPASVVLNASGGLFSLKMETLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEP
ITAFQCPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSSERIACQ
FCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSD
DQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTAMHEA
KLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHILKENDQARFLQ
SAKNIAERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNPPSIREELCTASHDTIT
VHWISDDEFSISSYELQYTIFTGQANFISKSWCSWGLWPEIRKCKEAVSCSRLAGAPRGLYNSVDSWMIV
PNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQPFKLDPKMTHKKLKISNDGLQMEKDE
SSLKKSHTPERFSGTGCYGAAGNIFIDSGCHYWEVVMGSSTWYAIGIAYKSAPKNEWIGKNASSWVFSRC
NSNFVVRHNNKEMLVDVPPHLKRLGVLLDYDNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWNKSLMI
LSGLPAPDFIDYPERQECNCRPQESPYVSGMKTCH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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