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Report for CCDS14138.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14138.1 Public Homo sapiens X MID1 24 110 108 CCDS HistoryNCBI Gene:4281Re-query CCDS DB by CCDS ID:14138.1Re-query CCDS DB by GeneID:4281See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14138.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317552.9 ENSP00000312678.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000317552.9Link to Ensembl Protein Viewer:ENSP00000312678.4Re-query CCDS DB by Nucleotide ID:ENST00000317552Re-query CCDS DB by Protein ID:ENSP00000312678
Original member Current member EBI ENST00000380779.5 ENSP00000370156.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380779.5Link to Ensembl Protein Viewer:ENSP00000370156.1Re-query CCDS DB by Nucleotide ID:ENST00000380779Re-query CCDS DB by Protein ID:ENSP00000370156
Original member Current member EBI ENST00000380780.5 ENSP00000370157.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380780.5Link to Ensembl Protein Viewer:ENSP00000370157.1Re-query CCDS DB by Nucleotide ID:ENST00000380780Re-query CCDS DB by Protein ID:ENSP00000370157
Original member Current member EBI ENST00000380785.5 ENSP00000370162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380785.5Link to Ensembl Protein Viewer:ENSP00000370162.1Re-query CCDS DB by Nucleotide ID:ENST00000380785Re-query CCDS DB by Protein ID:ENSP00000370162
Original member Current member EBI ENST00000380787.5 ENSP00000370164.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380787.5Link to Ensembl Protein Viewer:ENSP00000370164.1Re-query CCDS DB by Nucleotide ID:ENST00000380787Re-query CCDS DB by Protein ID:ENSP00000370164
Original member Current member EBI ENST00000453318.6 ENSP00000414521.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453318.6Link to Ensembl Protein Viewer:ENSP00000414521.2Re-query CCDS DB by Nucleotide ID:ENST00000453318Re-query CCDS DB by Protein ID:ENSP00000414521
Original member Current member NCBI NM_000381.4 NP_000372.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000381.4Link to Protein Sequence:NP_000372.1Re-query CCDS DB by Nucleotide ID:NM_000381Re-query CCDS DB by Protein ID:NP_000372Link to BLAST:NP_000372.1
Original member Current member NCBI NM_001098624.2 NP_001092094.1 Accepted alive Link to Nucleotide Sequence:NM_001098624.2Link to Protein Sequence:NP_001092094.1Re-query CCDS DB by Nucleotide ID:NM_001098624Re-query CCDS DB by Protein ID:NP_001092094Link to BLAST:NP_001092094.1
Original member Current member NCBI NM_001193277.1 NP_001180206.1 Accepted alive Link to Nucleotide Sequence:NM_001193277.1Link to Protein Sequence:NP_001180206.1Re-query CCDS DB by Nucleotide ID:NM_001193277Re-query CCDS DB by Protein ID:NP_001180206Link to BLAST:NP_001180206.1
Original member Current member NCBI NM_001347733.2 NP_001334662.1 Accepted alive Link to Nucleotide Sequence:NM_001347733.2Link to Protein Sequence:NP_001334662.1Re-query CCDS DB by Nucleotide ID:NM_001347733Re-query CCDS DB by Protein ID:NP_001334662Link to BLAST:NP_001334662.1
Original member Current member NCBI NM_033290.4 NP_150632.1 Accepted alive Link to Nucleotide Sequence:NM_033290.4Link to Protein Sequence:NP_150632.1Re-query CCDS DB by Nucleotide ID:NM_033290Re-query CCDS DB by Protein ID:NP_150632Link to BLAST:NP_150632.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000372.1 667 O15344-1 667 100% 0 0
NP_001092094.1 667 O15344-1 667 100% 0 0
NP_001180206.1 667 O15344-1 667 100% 0 0
NP_001334662.1 667 O15344-1 667 100% 0 0
NP_150632.1 667 O15344-1 667 100% 0 0

Chromosomal Locations for CCDS 14138.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 10449368 10449716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10454870 10455077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10459646 10459807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10469697 10469840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10474623 10474750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10482480 10482628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10495584 10495691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10523092 10523187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10566888 10567547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGGAAACACTGGAGTCAGAACTGACCTGCCCTATTTGTCTGGAGCTCTTTGAGGACCCTCTTCTACTGC
CCTGCGCACACAGCCTCTGCTTCAACTGCGCCCACCGCATCCTAGTATCACACTGTGCCACCAACGAGTC
TGTGGAGTCCATCACCGCCTTCCAGTGCCCCACCTGCCGGCATGTCATCACCCTCAGCCAGCGAGGTCTA
GACGGGCTCAAGCGCAACGTCACCCTACAGAACATCATCGACAGGTTCCAGAAAGCATCAGTGAGCGGGC
CCAACTCTCCCAGCGAGACCCGTCGGGAGCGGGCCTTTGACGCCAACACCATGACCTCCGCCGAGAAGGT
CCTCTGCCAGTTTTGTGACCAGGATCCTGCCCAGGACGCTGTGAAGACCTGTGTCACTTGTGAAGTATCC
TACTGTGACGAGTGCCTGAAAGCCACTCACCCGAATAAGAAGCCCTTTACAGGCCATCGTCTGATTGAGC
CAATTCCGGACTCTCACATCCGGGGGCTGATGTGCTTGGAGCATGAGGATGAGAAGGTGAATATGTACTG
TGTGACCGATGACCAGTTAATCTGTGCCTTGTGTAAACTGGTTGGGCGGCACCGCGATCATCAGGTGGCA
GCTTTGAGTGAGCGCTATGACAAATTGAAGCAAAACTTAGAGAGTAACCTCACCAACCTTATTAAGAGGA
ACACAGAACTGGAGACCCTTTTGGCTAAACTCATCCAAACCTGTCAACATGTTGAAGTCAATGCATCACG
TCAAGAAGCCAAATTGACAGAGGAGTGTGATCTTCTCATTGAGATCATTCAGCAAAGACGACAGATTATT
GGAACCAAGATCAAAGAAGGGAAGGTGATGAGGCTTCGCAAACTGGCTCAGCAGATTGCAAACTGCAAAC
AGTGCATTGAGCGGTCAGCATCACTCATCTCCCAAGCGGAACACTCTCTGAAGGAGAATGATCATGCGCG
TTTCCTACAGACTGCTAAGAATATCACCGAGAGAGTCTCCATGGCAACTGCATCCTCCCAGGTTCTAATT
CCTGAAATCAACCTCAATGACACATTTGACACCTTTGCCTTAGATTTTTCCCGAGAGAAGAAACTGCTAG
AATGTCTGGATTACCTTACAGCTCCCAACCCTCCCACAATTAGAGAAGAGCTCTGCACAGCTTCATATGA
CACCATCACTGTGCATTGGACCTCCGATGATGAGTTCAGCGTGGTCTCCTACGAGCTCCAGTACACCATA
TTCACCGGACAAGCCAACGTCGTTAGTCTGTGTAATTCGGCTGATAGCTGGATGATAGTACCCAACATCA
AGCAGAACCACTACACGGTGCACGGTCTGCAGAGCGGCACCAAGTACATCTTCATGGTCAAGGCCATCAA
CCAGGCGGGCAGCCGCAGCAGTGAGCCTGGGAAGTTGAAGACAAACAGCCAACCATTTAAACTGGATCCC
AAATCTGCTCATCGAAAACTGAAGGTGTCCCATGATAACTTGACAGTAGAACGTGATGAGTCATCATCCA
AGAAGAGTCACACACCTGAACGCTTCACCAGCCAGGGGAGCTATGGAGTAGCTGGAAATGTGTTTATTGA
TAGTGGCCGGCATTATTGGGAAGTGGTCATAAGTGGAAGCACATGGTATGCCATTGGTCTTGCTTACAAA
TCAGCCCCGAAGCATGAATGGATTGGGAAGAACTCTGCTTCCTGGGCGCTCTGCCGCTGCAACAATAACT
GGGTGGTGAGACACAATAGCAAGGAAATCCCCATTGAGCCTGCCCCCCACCTCCGGCGCGTGGGCATCCT
GCTGGACTATGATAACGGCTCTATCGCCTTTTATGATGCTTTGAACTCCATCCACCTCTACACCTTCGAC
GTCGCATTTGCGCAGCCTGTTTGCCCCACCTTCACCGTGTGGAACAAGTGTCTGACGATTATCACTGGGC
TCCCTATCCCAGACCATTTGGACTGCACAGAGCAGCTGCCGTGA

Translation (667 aa):
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCRHVITLSQRGL
DGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQFCDQDPAQDAVKTCVTCEVS
YCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVA
ALSERYDKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQII
GTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLI
PEINLNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDP
KSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAYK
SAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSIAFYDALNSIHLYTFD
VAFAQPVCPTFTVWNKCLTIITGLPIPDHLDCTEQLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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