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Report for CCDS14080.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14080.1 Public Homo sapiens 22 BRD1 24 110 108 CCDS HistoryNCBI Gene:23774Re-query CCDS DB by CCDS ID:14080.1Re-query CCDS DB by GeneID:23774See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14080.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216267.12 ENSP00000216267.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000216267.12Link to Ensembl Protein Viewer:ENSP00000216267.8Re-query CCDS DB by Nucleotide ID:ENST00000216267Re-query CCDS DB by Protein ID:ENSP00000216267
Original member Current member EBI ENST00000404034.5 ENSP00000384076.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404034.5Link to Ensembl Protein Viewer:ENSP00000384076.1Re-query CCDS DB by Nucleotide ID:ENST00000404034Re-query CCDS DB by Protein ID:ENSP00000384076
Original member Current member NCBI NM_001304809.1 NP_001291738.1 Accepted alive Link to Nucleotide Sequence:NM_001304809.1Link to Protein Sequence:NP_001291738.1Re-query CCDS DB by Nucleotide ID:NM_001304809Re-query CCDS DB by Protein ID:NP_001291738Link to BLAST:NP_001291738.1
Original member Current member NCBI NM_001394551.1 NP_001381480.1 Accepted alive Link to Nucleotide Sequence:NM_001394551.1Link to Protein Sequence:NP_001381480.1Re-query CCDS DB by Nucleotide ID:NM_001394551Re-query CCDS DB by Protein ID:NP_001381480Link to BLAST:NP_001381480.1
Original member Current member NCBI NM_001394552.1 NP_001381481.1 Accepted alive Link to Nucleotide Sequence:NM_001394552.1Link to Protein Sequence:NP_001381481.1Re-query CCDS DB by Nucleotide ID:NM_001394552Re-query CCDS DB by Protein ID:NP_001381481Link to BLAST:NP_001381481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291738.1 1058 O95696-1 1058 100% 0 0
NP_001381480.1 1058 O95696-1 1058 100% 0 0
NP_001381481.1 1058 O95696-1 1058 100% 0 0

Chromosomal Locations for CCDS 14080.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 49774233 49774416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49775591 49775745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49776050 49776159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49777034 49777161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49777678 49777813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49787390 49787494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49794034 49794294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49797805 49798117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49798558 49798686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49798988 49799119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49804204 49804360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 49822951 49824317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3177 nt):
ATGAGGAGGAAAGGACGATGTCATCGAGGCTCTGCAGCGAGGCATCCTTCTTCCCCATGCAGTGTTAAAC
ACTCCCCTACGCGAGAAACGCTGACCTACGCTCAAGCTCAAAGGATGGTAGAGATAGAAATTGAAGGGCG
CTTGCACAGGATCAGTATTTTTGATCCCCTGGAGATCATATTGGAAGATGACCTCACTGCTCAAGAGATG
AGTGAGTGCAACAGCAACAAGGAAAACAGCGAGCGGCCTCCTGTCTGCTTAAGAACTAAGCGTCACAAAA
ACAACAGAGTCAAAAAGAAAAACGAGGCCCTCCCCAGCGCCCACGGCACGCCGGCCTCGGCCAGTGCCCT
CCCGGAGCCCAAGGTGCGCATCGTGGAGTACAGCCCTCCGTCCGCCCCCAGGAGGCCTCCTGTGTACTAC
AAGTTCATCGAGAAGTCGGCCGAGGAACTGGACAACGAGGTGGAGTATGACATGGACGAGGAGGACTATG
CCTGGCTGGAGATCGTCAATGAGAAGCGCAAGGGCGACTGCGTCCCCGCCGTGTCGCAGAGCATGTTTGA
GTTCCTGATGGACCGCTTCGAGAAGGAGTCGCACTGCGAGAACCAGAAGCAGGGCGAGCAGCAGTCTCTG
ATCGACGAGGACGCCGTGTGCTGCATCTGCATGGACGGGGAGTGTCAGAACAGCAACGTGATCCTCTTCT
GCGACATGTGCAACCTGGCCGTGCACCAGGAGTGCTACGGGGTGCCCTACATCCCCGAGGGCCAGTGGCT
CTGCCGCCACTGCCTGCAGTCGCGGGCCCGGCCCGCCGACTGTGTGCTGTGCCCCAACAAGGGTGGTGCC
TTCAAAAAGACAGATGACGACCGCTGGGGTCACGTGGTGTGTGCCCTGTGGATCCCAGAGGTCGGCTTTG
CCAACACGGTGTTCATCGAGCCCATCGATGGGGTGAGGAACATCCCTCCAGCCCGGTGGAAACTGACATG
CTACCTCTGTAAGCAGAAGGGCGTGGGTGCCTGCATCCAGTGCCACAAAGCAAACTGCTACACAGCATTC
CATGTGACGTGTGCCCAGAAGGCTGGCCTGTACATGAAAATGGAGCCCGTGAAGGAACTGACTGGCGGTG
GCACCACCTTCTCCGTCAGAAAGACCGCTTACTGTGATGTCCACACGCCTCCAGGCTGCACCCGGAGGCC
TCTGAATATTTACGGGGATGTCGAAATGAAAAATGGCGTCTGTCGAAAAGAGAGCTCGGTTAAAACGGTC
AGGTCCACATCCAAGGTCAGGAAGAAGGCAAAAAAGGCTAAGAAAGCTCTGGCTGAGCCCTGCGCGGTCC
TGCCGACCGTGTGCGCTCCTTATATTCCCCCGCAGAGGTTAAATAGGATTGCGAATCAGGTGGCCATTCA
GCGGAAGAAGCAGTTTGTGGAGCGAGCCCACAGCTACTGGCTGCTCAAGCGGCTGTCCAGGAACGGGGCC
CCCCTGCTGCGGCGGCTGCAGTCCAGCCTGCAGTCTCAGCGAAGCTCACAGCAGAGAGAAAATGATGAGG
AGATGAAGGCTGCCAAAGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGCTCGCCT
GCTGATCGAGCTGCTGCGCAAGCGGGAGAAGCTCAAGCGTGAGCAGGTGAAGGTGGAGCAGGTCGCCATG
GAGCTGCGGCTGACCCCGCTGACGGTGCTGCTGCGCTCAGTGCTGGACCAGCTGCAAGACAAGGACCCCG
CCAGGATATTTGCGCAGCCCGTGAGTCTGAAGGAGGTACCAGATTATTTGGATCACATTAAACATCCCAT
GGACTTTGCCACAATGAGGAAACGGTTAGAAGCTCAAGGGTATAAAAACCTCCATGAGTTTGAGGAGGAT
TTTGATCTCATTATAGATAACTGCATGAAGTACAATGCCAGGGACACCGTGTTCTATAGAGCCGCGGTGA
GGCTGCGCGATCAGGGAGGTGTTGTTCTGAGGCAGGCCCGGCGCGAGGTGGACAGCATCGGCTTGGAAGA
GGCCTCGGGGATGCACCTGCCTGAGCGGCCTGCTGCGGCACCGCGGCGGCCTTTCTCCTGGGAAGACGTG
GACAGGTTGCTGGACCCCGCCAACAGAGCCCACCTGGGCCTGGAGGAGCAGCTGAGAGAGCTGCTGGACA
TGCTCGACCTCACCTGCGCTATGAAGTCCAGCGGCTCCCGGAGCAAGCGGGCAAAGCTGCTCAAAAAGGA
AATTGCCCTTCTCCGAAACAAGCTGAGCCAGCAGCACAGCCAGCCCCTGCCCACGGGGCCAGGCTTGGAA
GGCTTCGAAGAGGACGGAGCTGCGCTGGGGCCGGAGGCGGGCGAGGAAGTCCTTCCGAGGTTGGAGACTC
TTCTGCAGCCAAGGAAAAGGTCGCGGAGCACATGCGGAGACTCCGAGGTGGAGGAGGAGTCCCCAGGAAA
GCGCCTGGACGCAGGTCTCACCAACGGCTTTGGGGGTGCGAGGAGCGAGCAGGAGCCGGGCGGCGGCCTG
GGGAGGAAGGCCACACCCCGACGACGCTGTGCCTCCGAGTCCAGCATCTCCTCCAGCAACAGCCCGCTCT
GCGACTCGAGCTTTAATGCGCCCAAATGTGGGCGGGGCAAACCGGCTCTTGTGCGACGGCACACGCTGGA
GGACCGCAGTGAGCTGATCTCCTGCATCGAGAATGGGAACTACGCCAAGGCGGCCAGGATCGCAGCCGAA
GTCGGCCAGAGCAGCATGTGGATCTCCACTGATGCCGCCGCCTCGGTGCTGGAGCCTCTGAAGGTGGTGT
GGGCCAAGTGCAGCGGCTACCCCTCCTACCCGGCACTGATCATCGACCCCAAGATGCCCCGTGTGCCTGG
CCACCACAACGGCGTCACCATCCCGGCCCCACCCCTGGACGTGCTGAAGATTGGGGAGCACATGCAGACC
AAGTCTGATGAGAAGCTGTTCCTCGTTCTCTTTTTTGATAATAAGAGAAGTTGGCAGTGGCTTCCTAAGT
CCAAAATGGTTCCCCTTGGTATTGACGAAACTATAGACAAGTTAAAGATGATGGAAGGGAGGAATTCCAG
CATCCGGAAGGCCGTGCGGATCGCTTTTGACCGCGCCATGAACCACCTGAGCCGCGTCCACGGGGAGCCG
ACCAGCGACCTCAGTGACATTGACTGA

Translation (1058 aa):
MRRKGRCHRGSAARHPSSPCSVKHSPTRETLTYAQAQRMVEIEIEGRLHRISIFDPLEIILEDDLTAQEM
SECNSNKENSERPPVCLRTKRHKNNRVKKKNEALPSAHGTPASASALPEPKVRIVEYSPPSAPRRPPVYY
KFIEKSAEELDNEVEYDMDEEDYAWLEIVNEKRKGDCVPAVSQSMFEFLMDRFEKESHCENQKQGEQQSL
IDEDAVCCICMDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPADCVLCPNKGGA
FKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIPPARWKLTCYLCKQKGVGACIQCHKANCYTAF
HVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHTPPGCTRRPLNIYGDVEMKNGVCRKESSVKTV
RSTSKVRKKAKKAKKALAEPCAVLPTVCAPYIPPQRLNRIANQVAIQRKKQFVERAHSYWLLKRLSRNGA
PLLRRLQSSLQSQRSSQQRENDEEMKAAKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQVAM
ELRLTPLTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEED
FDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVDSIGLEEASGMHLPERPAAAPRRPFSWEDV
DRLLDPANRAHLGLEEQLRELLDMLDLTCAMKSSGSRSKRAKLLKKEIALLRNKLSQQHSQPLPTGPGLE
GFEEDGAALGPEAGEEVLPRLETLLQPRKRSRSTCGDSEVEEESPGKRLDAGLTNGFGGARSEQEPGGGL
GRKATPRRRCASESSISSSNSPLCDSSFNAPKCGRGKPALVRRHTLEDRSELISCIENGNYAKAARIAAE
VGQSSMWISTDAAASVLEPLKVVWAKCSGYPSYPALIIDPKMPRVPGHHNGVTIPAPPLDVLKIGEHMQT
KSDEKLFLVLFFDNKRSWQWLPKSKMVPLGIDETIDKLKMMEGRNSSIRKAVRIAFDRAMNHLSRVHGEP
TSDLSDID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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