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Report for CCDS12364.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12364.1 Public Homo sapiens 19 B3GNT3 24 110 108 CCDS HistoryNCBI Gene:10331Re-query CCDS DB by CCDS ID:12364.1Re-query CCDS DB by GeneID:10331See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12364.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318683.7 ENSP00000321874.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318683.7Link to Ensembl Protein Viewer:ENSP00000321874.5Re-query CCDS DB by Nucleotide ID:ENST00000318683Re-query CCDS DB by Protein ID:ENSP00000321874
Original member Current member EBI ENST00000595387.1 ENSP00000472638.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595387.1Link to Ensembl Protein Viewer:ENSP00000472638.1Re-query CCDS DB by Nucleotide ID:ENST00000595387Re-query CCDS DB by Protein ID:ENSP00000472638
Original member Current member NCBI NM_014256.4 NP_055071.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014256.4Link to Protein Sequence:NP_055071.2Re-query CCDS DB by Nucleotide ID:NM_014256Re-query CCDS DB by Protein ID:NP_055071Link to BLAST:NP_055071.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055071.2 372 Q9Y2A9 372 100% 0 0

Chromosomal Locations for CCDS 12364.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17807808 17808374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17811571 17812122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGAAGTATCTCCGGCACCGGCGGCCCAATGCCACCCTCATTCTGGCCATCGGCGCTTTCACCCTCCTCC
TCTTCAGTCTGCTAGTGTCACCACCCACCTGCAAGGTCCAGGAGCAGCCACCGGCGATCCCCGAGGCCCT
GGCCTGGCCCACTCCACCCACCCGCCCAGCCCCGGCCCCGTGCCATGCCAACACCTCTATGGTCACCCAC
CCGGACTTCGCCACGCAGCCGCAGCACGTTCAGAACTTCCTCCTGTACAGACACTGCCGCCACTTTCCCC
TGCTGCAGGACGTGCCCCCCTCTAAGTGCGCGCAGCCGGTCTTCCTGCTGCTGGTGATCAAGTCCTCCCC
TAGCAACTATGTGCGCCGCGAGCTGCTGCGGCGCACGTGGGGCCGCGAGCGCAAGGTACGGGGTTTGCAG
CTGCGCCTCCTCTTCCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCCGCAAGGTCAACCGGCTGCTGG
AGCTGGAGGCACAGACTCACGGAGACATCCTGCAGTGGGACTTCCACGACTCCTTCTTCAACCTCACGCT
CAAGCAGGTCCTGTTCTTACAGTGGCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCTCAACGGGGAT
GATGACGTCTTTGCACACACAGACAACATGGTCTTCTACCTGCAGGACCATGACCCTGGCCGCCACCTCT
TCGTGGGGCAACTGATCCAAAACGTGGGCCCCATCCGGGCTTTTTGGAGCAAGTACTATGTGCCAGAGGT
GGTGACTCAGAATGAGCGGTACCCACCCTATTGTGGGGGTGGTGGCTTCTTGCTGTCCCGCTTCACGGCC
GCTGCCCTGCGCCGTGCTGCCCATGTCTTGGACATCTTCCCCATTGATGATGTCTTCCTGGGTATGTGTC
TGGAGCTTGAGGGACTGAAGCCTGCCTCCCACAGCGGCATCCGCACGTCTGGCGTGCGGGCTCCATCGCA
ACGCCTGTCCTCCTTTGACCCCTGCTTCTACCGAGACCTGCTGCTGGTGCACCGCTTCCTACCTTATGAG
ATGCTGCTCATGTGGGATGCGCTGAACCAGCCCAACCTCACCTGCGGCAATCAGACACAGATCTACTGA

Translation (372 aa):
MKYLRHRRPNATLILAIGAFTLLLFSLLVSPPTCKVQEQPPAIPEALAWPTPPTRPAPAPCHANTSMVTH
PDFATQPQHVQNFLLYRHCRHFPLLQDVPPSKCAQPVFLLLVIKSSPSNYVRRELLRRTWGRERKVRGLQ
LRLLFLVGTASNPHEARKVNRLLELEAQTHGDILQWDFHDSFFNLTLKQVLFLQWQETRCANASFVLNGD
DDVFAHTDNMVFYLQDHDPGRHLFVGQLIQNVGPIRAFWSKYYVPEVVTQNERYPPYCGGGGFLLSRFTA
AALRRAAHVLDIFPIDDVFLGMCLELEGLKPASHSGIRTSGVRAPSQRLSSFDPCFYRDLLLVHRFLPYE
MLLMWDALNQPNLTCGNQTQIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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