NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12076.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12076.2 Public Homo sapiens 19 ADAT3 24 110 108 CCDS HistoryNCBI Gene:113179Re-query CCDS DB by CCDS ID:12076.2Re-query CCDS DB by GeneID:113179See the combined annotation on chromosome 19 in Sequence Viewer

Public Note for CCDS 12076.1
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript data and by conservation in other primates.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 12076.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329478.4 ENSP00000332448.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329478.4Link to Ensembl Protein Viewer:ENSP00000332448.2Re-query CCDS DB by Nucleotide ID:ENST00000329478Re-query CCDS DB by Protein ID:ENSP00000332448
Original member Current member NCBI NM_138422.4 NP_612431.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138422.4Link to Protein Sequence:NP_612431.2Re-query CCDS DB by Nucleotide ID:NM_138422Re-query CCDS DB by Protein ID:NP_612431Link to BLAST:NP_612431.2

Chromosomal Locations for CCDS 12076.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1912048 1913151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGATCCTCTGCTCCCGTCTCTGTCTCCCACAGTCGGCCTCGCTGAGGATGGAGCCCGCCCCGGGCCTCG
TGGAGCAGCCCAAGTGCTTGGAGGCCGGGAGCCCGGAGCCTGAGCCGGCGCCGTGGCAGGCCCTCCCTGT
CCTGTCCGAGAAGCAGTCAGGGGACGTGGAGCTGGTGCTGGCCTACGCCGCGCCCGTCCTGGACAAGCGC
CAGACCTCACGCCTCCTGAAGGAGGTGTCGGCCCTGCACCCGCTCCCCGCCCAGCCTCACCTCAAGCGGG
TGCGGCCCAGCCGCGATGCCGGCAGCCCCCACGCCCTGGAGATGCTGCTTTGCCTGGCTGGGCCGGCCTC
GGGCCCGCGCTCGCTGGCTGAGCTCCTGCCACGGCCGGCTGTGGACCCCCGCGGCCTGGGGCAACCCTTC
CTGGTGCCCGTGCCCGCCCGGCCGCCTCTGACCAGGGGCCAGTTCGAGGAGGCCCGGGCCCACTGGCCCA
CGTCCTTCCACGAGGACAAGCAGGTGACCAGCGCCCTGGCTGGGCGGCTCTTCTCCACGCAGGAGCGCGC
CGCCATGCAGAGCCACATGGAGCGGGCGGTGTGGGCGGCCCGGCGGGCAGCAGCGCGGGGCTTGCGGGCC
GTGGGGGCCGTGGTAGTGGACCCGGCCTCGGACCGCGTGCTGGCCACCGGCCACGACTGCAGCTGCGCGG
ACAACCCCCTCCTGCACGCCGTCATGGTGTGCGTGGACCTCGTGGCGCGCGGCCAGGGCCGCGGCACCTA
CGACTTCAGACCCTTCCCCGCCTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGCGCAGGCGCC
GTGCGTAAACTGGACGCAGACGAGGACGGCCTCCCCTACCTGTGCACTGGCTACGACCTGTACGTGACCC
GCGAGCCCTGCGCCATGTGCGCCATGGCCCTGGTGCACGCACGCATCCTGCGCGTCTTCTACGGTGCGCC
CTCGCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACGCACGGCCCGACCTCAACCACCGCTTCCAG
GTGTTCCGCGGGGTGCTGGAGGAGCAGTGCCGCTGGCTGGACCCCGACACGTAG

Translation (367 aa):
MILCSRLCLPQSASLRMEPAPGLVEQPKCLEAGSPEPEPAPWQALPVLSEKQSGDVELVLAYAAPVLDKR
QTSRLLKEVSALHPLPAQPHLKRVRPSRDAGSPHALEMLLCLAGPASGPRSLAELLPRPAVDPRGLGQPF
LVPVPARPPLTRGQFEEARAHWPTSFHEDKQVTSALAGRLFSTQERAAMQSHMERAVWAARRAAARGLRA
VGAVVVDPASDRVLATGHDCSCADNPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAPAAAPQAVRAGA
VRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSPDGALGTRFRIHARPDLNHRFQ
VFRGVLEEQCRWLDPDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH