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Report for CCDS11391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11391.1 Public Homo sapiens 17 KRT31 24 110 108 CCDS HistoryNCBI Gene:3881Re-query CCDS DB by CCDS ID:11391.1Re-query CCDS DB by GeneID:3881See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251645.3 ENSP00000251645.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251645.3Link to Ensembl Protein Viewer:ENSP00000251645.2Re-query CCDS DB by Nucleotide ID:ENST00000251645Re-query CCDS DB by Protein ID:ENSP00000251645
Original member Current member NCBI NM_002277.3 NP_002268.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002277.3Link to Protein Sequence:NP_002268.2Re-query CCDS DB by Nucleotide ID:NM_002277Re-query CCDS DB by Protein ID:NP_002268Link to BLAST:NP_002268.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002268.2 416 Q15323 416 100% 0 0

Chromosomal Locations for CCDS 11391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41394016 41394169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41394848 41395068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41395245 41395370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41395462 41395623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41396420 41396576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41396913 41396995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41397192 41397539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGCCCTACAACTTCTGCCTGCCCAGCCTGAGCTGCCGCACCAGCTGCTCCTCCCGGCCCTGCGTGCCCC
CCAGCTGCCACAGCTGCACCCTGCCCGGGGCCTGCAACATCCCCGCCAATGTGAGCAACTGCAACTGGTT
CTGCGAGGGCTCCTTCAATGGTAGCGAGAAGGAGACTATGCAGTTCCTGAACGACCGCCTGGCCAGCTAC
CTGGAGAAAGTGCGTCAGCTGGAGCGGGACAACGCGGAGCTGGAGAACCTCATCCGGGAGCGGTCTCAGC
AGCAGGAGCCCTTGCTGTGCCCCAGTTACCAGTCCTATTTTAAGACCATTGAGGAGCTCCAGCAGAAGAT
CCTGTGTACCAAGTCTGAGAATGCCAGGCTTGTGGTGCAGATCGACAACGCCAAGCTGGCTGCGGATGAT
TTCAGAACCAAGTACCAGACCGAGCTGTCCCTGCGGCAGCTGGTGGAGTCGGACATCAACGGTCTGCGCA
GGATCCTGGATGAGCTGACCCTGTGCAAGTCCGACCTGGAGGCCCAGGTGGAGTCCCTGAAGGAGGAGCT
GCTCTGCCTCAAGAGCAACCATGAGCAGGAGGTCAATACCCTGCGCTGCCAGCTTGGAGACCGCCTCAAT
GTGGAGGTGGATGCTGCTCCCACTGTGGACCTGAATCGGGTGCTGAACGAGACCAGGAGTCAGTATGAGG
CCCTGGTGGAAACCAACCGCAGGGAAGTGGAGCAATGGTTCACCACGCAGACCGAGGAGCTGAACAAGCA
GGTGGTATCCAGCTCAGAGCAGCTGCAGTCCTACCAGGCGGAGATCATCGAGCTGAGACGCACAGTCAAC
GCCCTGGAGATCGAGCTGCAGGCCCAGCACAACCTGCGAGACTCTCTGGAAAACACGCTGACAGAGAGTG
AGGCCCGCTACAGCTCCCAGCTGTCCCAGGTGCAGAGCCTGATCACCAACGTGGAGTCCCAGCTGGCGGA
GATCCGCAGTGACCTGGAGCGGCAGAACCAGGAGTACCAGGTGCTGCTGGATGTGCGTGCCCGGCTGGAG
TGTGAGATCAACACATACCGGAGCCTGCTGGAGAGCGAGGACTGCAATCTGCCCAGCAATCCCTGTGCCA
CGACCAACGCGTGCAGCAAGCCCATCGGACCCTGTCTCTCCAATCCCTGTACCTCTTGTGTCCCTCCTGC
CCCCTGCACACCCTGTGCCCCACGCCCCCGCTGTGGGCCCTGCAATTCCTTCGTGCGCTAG

Translation (416 aa):
MPYNFCLPSLSCRTSCSSRPCVPPSCHSCTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLNDRLASY
LEKVRQLERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCTKSENARLVVQIDNAKLAADD
FRTKYQTELSLRQLVESDINGLRRILDELTLCKSDLEAQVESLKEELLCLKSNHEQEVNTLRCQLGDRLN
VEVDAAPTVDLNRVLNETRSQYEALVETNRREVEQWFTTQTEELNKQVVSSSEQLQSYQAEIIELRRTVN
ALEIELQAQHNLRDSLENTLTESEARYSSQLSQVQSLITNVESQLAEIRSDLERQNQEYQVLLDVRARLE
CEINTYRSLLESEDCNLPSNPCATTNACSKPIGPCLSNPCTSCVPPAPCTPCAPRPRCGPCNSFVR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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