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Report for CCDS10310.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10310.1 Public Homo sapiens 15 TMED3 24 110 108 CCDS HistoryNCBI Gene:23423Re-query CCDS DB by CCDS ID:10310.1Re-query CCDS DB by GeneID:23423See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10310.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299705.10 ENSP00000299705.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299705.10Link to Ensembl Protein Viewer:ENSP00000299705.5Re-query CCDS DB by Nucleotide ID:ENST00000299705Re-query CCDS DB by Protein ID:ENSP00000299705
Original member Current member NCBI NM_007364.4 NP_031390.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007364.4Link to Protein Sequence:NP_031390.1Re-query CCDS DB by Nucleotide ID:NM_007364Re-query CCDS DB by Protein ID:NP_031390Link to BLAST:NP_031390.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031390.1 217 Q9Y3Q3-1 217 100% 0 0

Chromosomal Locations for CCDS 10310.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 79311250 79311417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79313757 79314005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79321978 79322214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGGCAGCACTGTCCCGCGCTCCGCCTCCGTGCTGCTTCTGCTGCTGCTCCTGCGCCGGGCCGAGCAGC
CCTGCGGGGCCGAGCTCACCTTCGAGCTGCCGGACAACGCCAAGCAGTGCTTCCACGAGGAGGTGGAGCA
GGGCGTGAAGTTCTCCCTGGATTACCAGGTCATCACTGGAGGCCACTACGATGTTGACTGCTATGTAGAG
GACCCCCAGGGGAACACCATCTACAGAGAAACGAAGAAGCAGTACGACAGCTTCACGTACCGGGCTGAAG
TCAAGGGCGTTTATCAGTTTTGCTTCAGTAATGAGTTTTCCACCTTCTCTCACAAGACCGTCTACTTTGA
CTTTCAAGTGGGCGATGAGCCTCCCATTCTCCCAGACATGGGGAACAGGGTCACAGCTCTCACCCAGATG
GAGTCCGCCTGCGTGACCATCCATGAGGCTCTGAAAACGGTGATTGACTCCCAGACGCATTACCGGCTGC
GGGAGGCCCAGGACCGGGCCCGAGCAGAAGACCTTAATAGCCGAGTCTCTTACTGGTCTGTTGGCGAGAC
GATTGCCCTGTTCGTGGTCAGCTTCAGTCAGGTGCTACTGTTGAAAAGCTTCTTCACAGAAAAACGACCC
ATCAGCAGGGCAGTCCACTCCTAG

Translation (217 aa):
MGSTVPRSASVLLLLLLLRRAEQPCGAELTFELPDNAKQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVE
DPQGNTIYRETKKQYDSFTYRAEVKGVYQFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQM
ESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRP
ISRAVHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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