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Report for CCDS9654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9654.1 Public Homo sapiens 14 PPP2R3C 24 110 108 CCDS HistoryNCBI Gene:55012Re-query CCDS DB by CCDS ID:9654.1Re-query CCDS DB by GeneID:55012See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9654.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261475.10 ENSP00000261475.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261475.10Link to Ensembl Protein Viewer:ENSP00000261475.5Re-query CCDS DB by Nucleotide ID:ENST00000261475Re-query CCDS DB by Protein ID:ENSP00000261475
Original member Current member NCBI NM_017917.4 NP_060387.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017917.4Link to Protein Sequence:NP_060387.2Re-query CCDS DB by Nucleotide ID:NM_017917Re-query CCDS DB by Protein ID:NP_060387Link to BLAST:NP_060387.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060387.2 453 Q969Q6-1 453 100% 0 0

Chromosomal Locations for CCDS 9654.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 35085590 35085778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35087951 35088010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35091070 35091207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35095048 35095184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35096558 35096633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35096709 35096764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35099252 35099384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35107304 35107374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35108139 35108236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35109819 35109931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35110525 35110629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35116610 35116737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35121902 35121959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1362 nt):
ATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAAAAAAAAAAGTG
AACAAGAATTAAAAGATGAAGAAATGGATTTATTTACAAAATATTACTCCGAATGGAAAGGAGGTAGAAA
AAACACAAATGAATTCTATAAGACCATTCCCCGGTTTTATTATAGGCTGCCTGCTGAAGATGAAGTCTTA
CTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGATAATG
AAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
GATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCA
AAAGTCTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATG
TCATGAGAAAAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTA
CCTTCGGGAATCTGATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTG
GAAAAATCTTTCTACTCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAA
GAACAGGAAAGATAAAAATTCAAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGA
TGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGC
CAGTACTTGAATCTTGATAAAGATCACAATGGCATGCTCAGTAAAGAAGAACTCTCACGCTATGGAACAG
CTACCATGACCAATGTCTTCTTAGACCGTGTTTTCCAGGAGTGTCTCACTTATGATGGAGAAATGGACTA
TAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAACAGAAAGGAACCTGCAGCTCTACAATATATTTTC
AAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCTTTTCACTTAATTATTTCTTTAGGGCCATAC
AGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAAGATGTCAAGGATGAAATCTTTGACAT
GGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAACAGTAATCAAGGAGACACAGTA
ACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACA
GTGAAAACTCTGCAGACCTTGATGATACATGA

Translation (453 aa):
MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVL
LQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGAKCKQFFTA
KVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGL
EKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYG
QYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIF
KLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTV
TTILIDLNGFWTYENREALVANDSENSADLDDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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