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Report for CCDS94640.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94640.1 Public Homo sapiens X TAF7L 24 110 108 CCDS HistoryNCBI Gene:54457Re-query CCDS DB by CCDS ID:94640.1Re-query CCDS DB by GeneID:54457See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94640.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324762.10 ENSP00000320283.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324762.10Link to Ensembl Protein Viewer:ENSP00000320283.6Re-query CCDS DB by Nucleotide ID:ENST00000324762Re-query CCDS DB by Protein ID:ENSP00000320283
Current member NCBI NM_001410720.1 NP_001397649.1 Accepted alive Link to Nucleotide Sequence:NM_001410720.1Link to Protein Sequence:NP_001397649.1Re-query CCDS DB by Nucleotide ID:NM_001410720Re-query CCDS DB by Protein ID:NP_001397649Link to BLAST:NP_001397649.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397649.1 302 Q5H9L4-3 302 100% 0 0

Chromosomal Locations for CCDS 94640.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101269193 101269237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101275222 101275281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101276000 101276112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101277606 101277719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101278049 101278121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101278994 101279035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101281720 101281775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101282327 101282453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101283450 101283583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101286575 101286653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101287478 101287543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGAGTGAAAGCCAGGATGAAGTTCCTGATGAAGTTGAGAACCAGTTTATATTGCGTCTGCCTCTGGAAC
ATGCTTGTACTGTCAGGAACCTAGCACGTTCTCAAAGTGTCAAGATGAAGGATAAACTAAAAATTGACTT
ATTGCCTGATGGGCGCCATGCAGTTGTTGAAGTAGAAGATGTCCCACTAGCTGCTAAGCTGGTTGACTTG
CCTTGTGTTATTGAAAGCCTGAGAACGCTTGATAAAAAAACCTTTTATAAAACAGCAGACATTTCTCAGA
TGCTTGTGTGCACTGCTGATGGTGATATCCACCTTTCTCCAGAAGAACCAGCTGCCTCTACTGATCCTAA
TATAGTCAGGAAAAAAGAAAGGGGGAGAGAAGAAAAATGTGTCTGGAAGCATGGCATTACGCCACCACTT
AAGAATGTCAGAAAGAAAAGGTTCCGGAAAACACAAAAAAAGGTCCCTGATGTCAAAGAAATGGAAAAAA
GCAGCTTTACTGAGTACATTGAATCTCCAGACGTGGAAAATGAAGTAAAGAGACTGCTGCGTTCGGATGC
TGAAGCCGTAAGTACCCGTTGGGAAGTCATTGCTGAAGATGGAACCAAGGAAATAGAAAGTCAAGGCTCC
ATCCCAGGATTTTTGATATCCTCGGGAATGAGCAGCCACAAGCAGGGTCATACCTCGTCAGTCATGGAAA
TTCAGAAGCAGATTGAGAAAAAGGAGAAAAAGCTCCATAAGATTCAGAATAAAGCACAAAGACAGAAGGA
TCTCATCATGAAAGTGGAAAACCTGACACTCAAGAATCATTTTCAGTCTGTGCTGGAGCAGCTTGAGTTA
CAGGAAAAACAAAAAAATGAGAAGCTCATTTCCCTACAGGAACAGTTGCAGCGTTTTCTGAAGAAGTGA

Translation (302 aa):
MSESQDEVPDEVENQFILRLPLEHACTVRNLARSQSVKMKDKLKIDLLPDGRHAVVEVEDVPLAAKLVDL
PCVIESLRTLDKKTFYKTADISQMLVCTADGDIHLSPEEPAASTDPNIVRKKERGREEKCVWKHGITPPL
KNVRKKRFRKTQKKVPDVKEMEKSSFTEYIESPDVENEVKRLLRSDAEAVSTRWEVIAEDGTKEIESQGS
IPGFLISSGMSSHKQGHTSSVMEIQKQIEKKEKKLHKIQNKAQRQKDLIMKVENLTLKNHFQSVLEQLEL
QEKQKNEKLISLQEQLQRFLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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