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Report for CCDS92140.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92140.1 Public Homo sapiens 16 ZNF747 24 110 108 CCDS HistoryNCBI Gene:65988Re-query CCDS DB by CCDS ID:92140.1Re-query CCDS DB by GeneID:65988See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92140.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000693075.1 ENSP00000509633.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000693075.1Link to Ensembl Protein Viewer:ENSP00000509633.1Re-query CCDS DB by Nucleotide ID:ENST00000693075Re-query CCDS DB by Protein ID:ENSP00000509633
Original member Current member NCBI NM_001305018.2 NP_001291947.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001305018.2Link to Protein Sequence:NP_001291947.1Re-query CCDS DB by Nucleotide ID:NM_001305018Re-query CCDS DB by Protein ID:NP_001291947Link to BLAST:NP_001291947.1

Chromosomal Locations for CCDS 92140.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30532499 30533151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30534197 30534310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30534451 30534679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACC
CAAACGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTC
CCGGGAGGAGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTAC
GGCCACCTGGGCGCGCTCGGAGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCG
AACTGTGGGATCCGGCTGCCCAGGATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACCCAGCAGATTC
CAGAAACAAGGAAGAGGAAAGACAAAGGGAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCC
GGGTCTCCTGGGCTGAAGGCTCCCCAAGCCCCCTTTGCCGGGTTGGAGCAGCTGTCCAAGGCCCGGCGCC
GGAGTCGCCCCCGCTTTTTTGCCCACCCCCCTGTCCCCCGAGCTGACCAGCGTCACGGCTGCTACGTGTG
CGGGAAGAGCTTCGCCTGGCGCTCCACACTGGTGGAGCACATTTACAGCCACAGGGGCGAGAAGCCCTTC
CACTGCGCAGACTGCGGCAAGGGCTTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTG
GGGAGCGGCCCCACCGCTGTCCCGAGTGTGGTCGGGCCTTCATGCGCCGCACGGCGCTGACTTCTCACCT
GCGCGTTCACACTGGCGAGAAGCCCTACCGCTGCCCGCAGTGTGGCCGCTGCTTCGGCCTGAAGACCGGC
ATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCGTAGGGGCCGGCGCCCTGGGGGGCTGT
CTGTGACCCTGACTCCTGTCCGCGGGGACCTGGACCCGCCTGTGGGCTTCCAGCTGTATCCAGAGATATT
CCAGGAATGTGGGTGA

Translation (331 aa):
MTDPSLGLTVPMAPPLAPLPPRDPNGAGSEWRKPGAVSFADVAVYFSREEWGCLRPAQRALYRDVMRETY
GHLGALGVGGSKPALISWVEEKAELWDPAAQDPEVAKCPTEADPADSRNKEEERQREGTGALEKPDPVAA
GSPGLKAPQAPFAGLEQLSKARRRSRPRFFAHPPVPRADQRHGCYVCGKSFAWRSTLVEHIYSHRGEKPF
HCADCGKGFGHASSLSKHRAIHRGERPHRCPECGRAFMRRTALTSHLRVHTGEKPYRCPQCGRCFGLKTG
MAKHQWVHRPGGEGRRGRRPGGLSVTLTPVRGDLDPPVGFQLYPEIFQECG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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