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Report for CCDS9212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9212.1 Public Homo sapiens 12 OASL 24 110 108 CCDS HistoryNCBI Gene:8638Re-query CCDS DB by CCDS ID:9212.1Re-query CCDS DB by GeneID:8638See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9212.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339275.10 ENSP00000341125.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339275.10Link to Ensembl Protein Viewer:ENSP00000341125.5Re-query CCDS DB by Nucleotide ID:ENST00000339275Re-query CCDS DB by Protein ID:ENSP00000341125
Original member Current member EBI ENST00000543677.2 ENSP00000444127.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543677.2Link to Ensembl Protein Viewer:ENSP00000444127.2Re-query CCDS DB by Nucleotide ID:ENST00000543677Re-query CCDS DB by Protein ID:ENSP00000444127
Original member Current member NCBI NM_001395418.1 NP_001382347.1 Accepted alive Link to Nucleotide Sequence:NM_001395418.1Link to Protein Sequence:NP_001382347.1Re-query CCDS DB by Nucleotide ID:NM_001395418Re-query CCDS DB by Protein ID:NP_001382347Link to BLAST:NP_001382347.1
Original member Current member NCBI NM_198213.3 NP_937856.1 Accepted alive Link to Nucleotide Sequence:NM_198213.3Link to Protein Sequence:NP_937856.1Re-query CCDS DB by Nucleotide ID:NM_198213Re-query CCDS DB by Protein ID:NP_937856Link to BLAST:NP_937856.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382347.1 255 Q15646-2 255 100% 0 0
NP_937856.1 255 Q15646-2 255 100% 0 0

Chromosomal Locations for CCDS 9212.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 121024027 121024137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121031442 121031617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121033461 121033743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121038774 121038971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGGCACTGATGCAGGAACTGTATAGCACACCAGCCTCCAGGCTGGACTCCTTCGTGGCTCAGTGGCTGC
AGCCCCACCGGGAGTGGAAGGAAGAGGTGCTAGACGCTGTGCGGACCGTGGAGGAGTTTCTGAGGCAGGA
GCATTTCCAGGGGAAGCGTGGGCTGGACCAGGATGTGCGGGTGCTGAAGGTAGTCAAGGTGGGCTCCTTC
GGGAATGGCACGGTTCTCAGGAGCACCAGAGAGGTGGAGCTGGTGGCGTTTCTGAGCTGTTTCCACAGCT
TCCAGGAGGCAGCCAAGCATCACAAAGATGTTCTGAGGCTGATATGGAAAACCATGTGGCAAAGCCAGGA
CCTGCTGGACCTCGGGCTCGAGGACCTGAGGATGGAGCAGAGAGTCCCCGATGCTCTCGTCTTCACCATC
CAGACCAGGGGGACTGCGGAGCCCATCACGGTCACCATTGTGCCTGCCTACAGAGCCCTGGGGCCTTCTC
TTCCCAACTCCCAGCCACCCCCTGAGGTCTATGTGAGCCTGATCAAGGCCTGCGGTGGTCCTGGAAATTT
CTGCCCATCCTTCAGCGAGCTGCAGAGAAATTTCGTGAAACATCGGCCAACTAAGCTGAAGAGCCTCCTG
CGCCTGGTGAAACACTGGTACCAGCAGGCCCATCATCCTGGATCCGGCCGACCCCACCCTCAACGTGGCA
GAAGGGTACAGATGGGACATCGTTGCTCAGAGGGCCTCCCAGTGCCTGAAACAGGACTGTTGCTATGA

Translation (255 aa):
MALMQELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVVKVGSF
GNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTI
QTRGTAEPITVTIVPAYRALGPSLPNSQPPPEVYVSLIKACGGPGNFCPSFSELQRNFVKHRPTKLKSLL
RLVKHWYQQAHHPGSGRPHPQRGRRVQMGHRCSEGLPVPETGLLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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