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Report for CCDS91781.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91781.1 Public Homo sapiens 12 MMP17 24 110 108 CCDS HistoryNCBI Gene:4326Re-query CCDS DB by CCDS ID:91781.1Re-query CCDS DB by GeneID:4326See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91781.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535291.5 ENSP00000441106.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535291.5Link to Ensembl Protein Viewer:ENSP00000441106.1Re-query CCDS DB by Nucleotide ID:ENST00000535291Re-query CCDS DB by Protein ID:ENSP00000441106
Current member NCBI NM_001411000.1 NP_001397929.1 Accepted alive Link to Nucleotide Sequence:NM_001411000.1Link to Protein Sequence:NP_001397929.1Re-query CCDS DB by Nucleotide ID:NM_001411000Re-query CCDS DB by Protein ID:NP_001397929Link to BLAST:NP_001397929.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397929.1 519 Q9ULZ9-2 519 100% 0 0

Chromosomal Locations for CCDS 91781.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 131838288 131838327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131838612 131838741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131840573 131840856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131841624 131841800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131843997 131844081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131845118 131845200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131845297 131845449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131849802 131850059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 131850925 131851274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1560 nt):
ATGCAGCAGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGACGAGGCCACCCTGGCCCTGATGAAAACCC
CACGCTGCTCCCTGCCAGACCTCCCTGTCCTGACCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCAC
CAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGAC
ACGGTGCGTGCACTCATGTACTACGCCCTCAAGGTCTGGAGCGACATTGCGCCCCTGAACTTCCACGAGG
TGGCGGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAAGGCCGACCATAACGACGGCTACCCCTTCGA
CGGCCCCGGCGGCACCGTGGCCCACGCCTTCTTCCCCGGCCACCACCACACCGCCGGGGACACCCACTTT
GACGATGACGAGGCCTGGACCTTCCGCTCCTCGGATGCCCACGGGATGGACCTGTTTGCAGTGGCTGTCC
ACGAGTTTGGCCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACACTCCATCATGCGGCCGTACTACCA
GGGCCCGGTGGGTGACCCGCTGCGCTACGGGCTCCCCTACGAGGACAAGGTGCGCGTCTGGCAGCTGTAC
GGTGTGCGGGAGTCTGTGTCTCCCACGGCGCAGCCCGAGGAGCCTCCCCTGCTGCCGGAGCCCCCAGACA
ACCGGTCCAGCGCCCCGCCCAGGAAGGACGTGCCCCACAGATGCAGCACTCACTTTGACGCGGTGGCCCA
GATCCGGGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCTGACGCGGGACCGGCACCTGGTG
TCCCTGCAGCCGGCACAGATGCACCGCTTCTGGCGGGGCCTGCCGCTGCACCTGGACAGCGTGGACGCCG
TGTACGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAAAGGAGACAGGTACTGGGTGTTCAAGGACAA
TAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCGGCATCGACGCTGCC
TTCTCCTGGGCCCACAATGACAGGACTTATTTCTTTAAGGACCAGCTGTACTGGCGCTACGATGACCACA
CGAGGCACATGGACCCCGGCTACCCCGCCCAGAGCCCCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGA
CGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGC
GAGCTGGAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCACAGG
CCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGGGCCCCGCGCCCCTCCAGGACAACATGACCA
GAGCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCTCTCCCCCGGGGGCCCCA
GGCCCACTGGTGGCTGCCACCATGCTGCTGCTGCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGG
CCCAGGCCCTGACGCTATGA

Translation (519 aa):
MQQFGGLEATGILDEATLALMKTPRCSLPDLPVLTQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHD
TVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHF
DDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPYEDKVRVWQLY
GVRESVSPTAQPEEPPLLPEPPDNRSSAPPRKDVPHRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLV
SLQPAQMHRFWRGLPLHLDSVDAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDFSLPPGGIDAA
FSWAHNDRTYFFKDQLYWRYDDHTRHMDPGYPAQSPLWRGVPSTLDDAMRWSDGASYFFRGQEYWKVLDG
ELEVAPGYPQSTARDWLVCGDSQADGSVAAGVDAAEGPRAPPGQHDQSRSEDGYEVCSCTSGASSPPGAP
GPLVAATMLLLLPPLSPGALWTAAQALTL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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