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Report for CCDS91221.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91221.1 Public Homo sapiens 10 C10orf67 24 110 108 CCDS HistoryNCBI Gene:256815Re-query CCDS DB by CCDS ID:91221.1Re-query CCDS DB by GeneID:256815See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 91221.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636213.3 ENSP00000490528.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000636213.3Link to Ensembl Protein Viewer:ENSP00000490528.2Re-query CCDS DB by Nucleotide ID:ENST00000636213Re-query CCDS DB by Protein ID:ENSP00000490528
Original member Current member NCBI NM_001371909.1 NP_001358838.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001371909.1Link to Protein Sequence:NP_001358838.1Re-query CCDS DB by Nucleotide ID:NM_001371909Re-query CCDS DB by Protein ID:NP_001358838Link to BLAST:NP_001358838.1

Chromosomal Locations for CCDS 91221.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 23204173 23204255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23223598 23223658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23223744 23223818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23239729 23239816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23250455 23250520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23250612 23250691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23266262 23266426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23267195 23267254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23282013 23282078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23289900 23289958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23291132 23291279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23303304 23303459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23320741 23320815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23322394 23322537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23333062 23333182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23344569 23344774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1653 nt):
ATGGCCTTGGTCCGGGATCGCAGGGCTCATTATGTCATGAGCATAGTTATTAGATGGGTTCACTGCTTTT
CCTCCTCCTTGAGGGGGACCTTTGGCACACGCTGGGAGGCCATGAAAGCCAAGGCCACCGAGCTGCGGGT
CTGCTGCGCGCGTAGGAAGCGAGAAGCTCGGGAATTCAAGCCCCCGCAAATGCGCGGGTCCACGAGACTT
AACATTTCAGATGATTTAAAGATTGGCTTTTTCAGCACAGACCATGCCACTCAAACTGATTCCAGTGAAA
TACTGTCAGTAAAAGAATTGAGTTCATCTACGCAAAAGTTAGCACAGATGATGAAATCCCTCCAGGTAGA
TTTTGGGTTCCTCAAACAATTGCTTCAGTTGAAGTTTGAGGACCGACTGAAAGAGGAATCTTTGAGTCTC
TTCACCATTCTGCATGACAGGATCCTAGAAATTGAAAAGCATTATCAACAGAATGAGGATAAGATGAGAA
AATCCTTCAATCAGCAGTTAGCTGATGCCATAGCTGTTATCAAAGGAATGTACCAGCAATTCTTTGAGGT
AGAAGAAGAGAATGTTTCTTTGCAAGATGCGAGTACTGTCAAAACAAATATTTTGTTAAGAAAACTGAAA
GAGAAAGAAGAAGTTATTAAAGAATTAAAAGAAGAACTAGACCAATATAAAGATTTTGGATTTCACAAAA
TGGAATCTTTTGCCAAAGAAACCAGCTCTCCAAAATCAAACCTAGAAAAGGAAAATTTGGAGTACAAAGT
GGAAAATGAGAGGCTGCTTCAGATCATTTCAGAGCTTGAAGAAGAAATCCAGATCAATCTAAAAGAAAAT
TCAGGATTAGAAGATGAACTTATAAGTATGAAAGAGATGGCAGAAAAGGATCACAAAACTATTCAAAAGT
TAATGGATAGTAGAGACAGATTAAGAGAAGAGCTTCATTATGAAAAATCATTAGTTCAGGATGTGATTAA
TAAACAGAAAGAGGACAAGGAAATGAGAAAAAAGTATGGCAGCTTAAGTGTAAAGGTTGCAAGATCAGCC
AAGGGGAGAGAAGCCTCTTTGTCCCCATGGCCCAAGTCTCCACCCAGCACCACAGCTTTGAGGCCACATT
CTGCGACCATGAGTGTATCATCTGCTGGGGCCCAGAAAGCTAAAATGCCAAAGAAGGCTTTAAAGGAAGA
CCAAGCTGTGGTTGAAGACAAACATGGTTTGGAGTCTCAAATAGAAGCATTAAAGGCAAATTTAGAGAAT
GAGAAAAAGAAGGTGGAAAGGTTTAGGAAGGAAGCTGATCGACTAAATAAAAGCTGGGAAAAGAGATTCT
TTATTCTCAGGAACAGCTTTCATGTCCTTAAGAATGAGATGTTTACAAGGCACACACTGTTTCGTCAGTT
TGCAGTGCTTGCTGACACATCCTTCAATTATATTAAAGTAAAACCCTTATTAGTGCAGTCTAGAACGACC
ATGACAGCTATATCCTCTTCAAGTCATTGTACATCTTCAATAGACGGTAAGCATGTGGATGTAGTCAGTG
ATCAGGCAGCCCTTCAACTTTCACCAAAAGGGAAGTTGTCGGAATCCCCAAAAGAAGAGTCCTTGGAGGA
GCCCTCCATGCGCCAGAGCAGCCCCGCAGAGACTGTTGATTAA

Translation (550 aa):
MALVRDRRAHYVMSIVIRWVHCFSSSLRGTFGTRWEAMKAKATELRVCCARRKREAREFKPPQMRGSTRL
NISDDLKIGFFSTDHATQTDSSEILSVKELSSSTQKLAQMMKSLQVDFGFLKQLLQLKFEDRLKEESLSL
FTILHDRILEIEKHYQQNEDKMRKSFNQQLADAIAVIKGMYQQFFEVEEENVSLQDASTVKTNILLRKLK
EKEEVIKELKEELDQYKDFGFHKMESFAKETSSPKSNLEKENLEYKVENERLLQIISELEEEIQINLKEN
SGLEDELISMKEMAEKDHKTIQKLMDSRDRLREELHYEKSLVQDVINKQKEDKEMRKKYGSLSVKVARSA
KGREASLSPWPKSPPSTTALRPHSATMSVSSAGAQKAKMPKKALKEDQAVVEDKHGLESQIEALKANLEN
EKKKVERFRKEADRLNKSWEKRFFILRNSFHVLKNEMFTRHTLFRQFAVLADTSFNYIKVKPLLVQSRTT
MTAISSSSHCTSSIDGKHVDVVSDQAALQLSPKGKLSESPKEESLEEPSMRQSSPAETVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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