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Report for CCDS91144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91144.1 Public Homo sapiens 1 KDM5B 24 110 108 CCDS HistoryNCBI Gene:10765Re-query CCDS DB by CCDS ID:91144.1Re-query CCDS DB by GeneID:10765See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91144.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648056.1 ENSP00000497113.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648056.1Link to Ensembl Protein Viewer:ENSP00000497113.1Re-query CCDS DB by Nucleotide ID:ENST00000648056Re-query CCDS DB by Protein ID:ENSP00000497113
Original member Current member NCBI NM_001399817.1 NP_001386746.1 Accepted alive Link to Nucleotide Sequence:NM_001399817.1Link to Protein Sequence:NP_001386746.1Re-query CCDS DB by Nucleotide ID:NM_001399817Re-query CCDS DB by Protein ID:NP_001386746Link to BLAST:NP_001386746.1

Chromosomal Locations for CCDS 91144.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 202729036 202729173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202729707 202730027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202730909 202731063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202731828 202731939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202733401 202733886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202735429 202735587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202736213 202736392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202740674 202740812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202741367 202741722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202742391 202742505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202742655 202742805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202745858 202745982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202746142 202746323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202748945 202749139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202750659 202750778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202752905 202753067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202755271 202755452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202756358 202756516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202758391 202758510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202760415 202760573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202762699 202762808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202764049 202764145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202766926 202767060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202773118 202773288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202774613 202774735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202777017 202777094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202808117 202808305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4620 nt):
ATGGAGGCGGCCACCACACTGCACCCAGGCCCGCGCCCGGCGCTGCCCCTCGGGGGCCCGGGCCCGCTGG
GCGAGTTCCTGCCTCCACCCGAGTGCCCGGTCTTCGAACCCAGCTGGGAAGAGTTCGCGGACCCCTTCGC
TTTCATCCACAAGATCCGGCCCATAGCCGAGCAGACTGGCATCTGTAAGGATTGGCAGCCACCATTTGCA
TGTGATGTTGATAAACTTCATTTTACGCCACGTATCCAGAGACTGAATGAATTGGAGGCCCAAACTCGTG
TAAAATTGAATTTCTTGGACCAGATTGCAAAGTACTGGGAGTTACAGGGAAGTACTCTGAAAATTCCACA
TGTGGAGAGGAAGATCTTGGACTTATTTCAGCTTAATAAGTTAGTTGCAGAAGAAGGTGGATTTGCAGTT
GTTTGCAAGGATAGAAAATGGACCAAAATTGCTACCAAGATGGGGTTTGCTCCTGGCAAAGCAGTGGGCT
CACATATCAGAGGGCATTATGAACGAATTCTCAACCCCTACAACTTATTCCTGTCCGGAGACAGCCTAAG
GTGTTTGCAGAAGCCAAACCTGACCACAGACACTAAGGACAAGGAGTACAAACCCCATGATATTCCCCAG
AGGCAGTCTGTGCAGCCTTCGGAAACGTGCCCCCCAGCCCGACGAGCAAAACGCATGAGAGCAGAGGCCA
TGAATATTAAAATAGAACCCGAGGAGACAACGGAAGCCAGAACTCATAATCTGAGACGTCGAATGGGTTG
TCCAACTCCAAAATGTGAAAATGAGAAAGAAATGAAGAGTAGCATCAAGCAAGAACCTATTGAGAGGAAA
GATTATATTGTAGAAAATGAGAAGGAAAAGCCCAAGAGTCGATCTAAAAAAGCCACCAATGCTGTGGACC
TGTATGTCTGTCTTTTATGTGGCAGTGGCAATGATGAAGACCGGCTACTGTTGTGTGATGGCTGTGATGA
CAGTTACCATACCTTTTGCTTGATCCCACCTCTCCATGATGTTCCCAAGGGAGACTGGAGGTGTCCTAAG
TGTTTGGCTCAGGAATGTAGTAAGCCACAAGAAGCATTTGGCTTTGAACAAGCAGCCAGGGACTATACCC
TCCGTACTTTTGGGGAAATGGCAGATGCGTTCAAATCTGATTACTTCAACATGCCAGTCCATATGGTCCC
CACAGAGCTTGTTGAGAAAGAATTTTGGAGACTAGTAAGCACTATTGAGGAGGATGTCACAGTGGAATAT
GGAGCTGACATTGCCTCAAAGGAATTTGGCAGTGGCTTTCCTGTCCGAGATGGGAAAATCAAACTCTCAC
CTGAGGAAGAGGAGTATCTTGATAGTGGCTGGAATTTGAACAACATGCCAGTGATGGAGCAGTCTGTCCT
TGCACATATTACTGCTGATATATGTGGCATGAAACTTCCTTGGTTGTATGTGGGAATGTGCTTTTCTTCA
TTCTGTTGGCACATTGAAGACCACTGGAGCTATTCAATTAACTACTTGCACTGGGGTGAGCCAAAAACCT
GGTATGGAGTCCCAGGGTATGCTGCTGAGCAGCTAGAAAATGTAATGAAGAAACTAGCTCCAGAACTCTT
TGTGTCCCAGCCGGATCTCCTCCATCAGCTTGTGACCATCATGAACCCCAATACCCTGATGACTCATGAA
GTGCCTGTTTACCGAACTAATCAGTGTGCTGGGGAGTTTGTGATTACATTTCCAAGAGCCTACCACAGTG
GTTTTAACCAGGGTTTTAATTTTGCTGAGGCTGTTAACTTCTGCACTGTTGATTGGCTGCCATTAGGCCG
ACAGTGTGTGGAGCATTATCGCTTGCTTCATCGATATTGTGTGTTTTCCCACGATGAGATGATCTGCAAG
ATGGCTTCCAAGGCTGATGTATTAGATGTTGTAGTGGCTTCAACTGTTCAGAAAGACATGGCCATTATGA
TTGAGGATGAGAAAGCTTTAAGAGAAACTGTCCGTAAATTGGGAGTGATTGATTCGGAAAGAATGGATTT
TGAGCTGTTGCCAGATGATGAACGTCAGTGTGTAAAATGCAAAACTACATGCTTCATGTCTGCCATCTCC
TGTTCTTGTAAACCTGGCCTTCTTGTTTGCCTGCATCATGTAAAAGAATTGTGTTCCTGTCCTCCTTACA
AATATAAATTGCGGTATAGGTACACGCTGGATGATCTCTACCCTATGATGAATGCATTGAAGCTTCGAGC
AGAATCTTACAACGAATGGGCCTTGAATGTGAATGAAGCTTTGGAGGCAAAGATCAACAAGAAGAAAAGC
CTTGTCAGCTTCAAGGCTTTAATTGAAGAATCTGAAATGAAGAAATTCCCAGACAATGATCTTTTGCGAC
ACCTTCGCCTAGTCACACAGGATGCAGAGAAGTGTGCCTCTGTTGCGCAGCAGTTGCTTAATGGCAAAAG
GCAAACTAGATATCGATCTGGTGGAGGGAAATCCCAAAATCAGTTGACAGTGAATGAGCTCCGGCAGTTT
GTAACACAGCTGTATGCTCTTCCATGTGTCCTCAGTCAGACACCATTACTAAAGGATCTCTTGAATCGTG
TAGAAGATTTTCAACAGCATAGTCAGAAACTACTCTCTGAGGAAACGCCTAGTGCTGCGGAGCTGCAGGA
CTTGCTAGATGTCAGCTTTGAATTTGATGTTGAACTTCCACAGCTTGCTGAGATGCGTATCCGTTTGGAA
CAAGCCCGTTGGCTAGAAGAGGTGCAGCAAGCTTGCCTAGACCCCAGCTCCCTTACTTTAGATGATATGA
GACGTCTCATAGACCTAGGGGTAGGGCTGGCCCCGTATTCAGCAGTGGAGAAAGCTATGGCCCGGCTGCA
GGAACTGCTCACAGTGTCAGAGCACTGGGACGACAAAGCCAAGAGTCTCCTCAAGGCCAGGCCACGACAT
TCATTGAATAGCCTTGCTACGGCAGTAAAGGAAATCGAAGAGATCCCTGCATATCTGCCCAATGGTGCGG
CTCTGAAAGACTCAGTGCAGAGAGCCAGAGACTGGCTTCAGGATGTAGAGGGCCTGCAGGCTGGAGGACG
TGTGCCAGTGTTAGACACACTCATAGAACTTGTTACACGAGGCCGATCTATCCCCGTACATCTGAATTCT
TTGCCAAGACTGGAAACCCTAGTAGCTGAGGTTCAGGCTTGGAAAGAATGTGCTGTTAATACATTCTTGA
CTGAGAATTCTCCATATTCTCTCTTAGAGGTGCTGTGTCCTCGATGTGATATTGGCCTTTTGGGATTGAA
AAGGAAGCAGAGAAAGTTAAAGGAGCCCTTGCCAAATGGAAAGAAAAAAAGCACCAAATTAGAGAGTCTG
AGTGACCTGGAGAGAGCTTTAACTGAAAGCAAGGAGACTGCTTCAGCTATGGCAACTCTTGGGGAAGCTC
GCCTAAGGGAAATGGAAGCCTTGCAGTCTCTCAGACTCGCCAATGAAGGGAAATTGCTGTCGCCTCTCCA
AGATGTGGATATAAAAATCTGCCTATGTCAGAAGGCCCCAGCTGCCCCTATGATTCAATGTGAACTCTGC
AGGGATGCTTTCCACACCAGTTGTGTGGCGGTACCCAGTATTTCACAGGGCCTGCGAATCTGGCTTTGTC
CCCATTGTCGGAGGTCAGAGAAACCTCCATTAGAGAAAATTCTGCCCCTGCTCGCCTCCCTTCAGCGTAT
CCGAGTTCGCCTTCCTGAGGGAGATGCACTTCGATATATGATTGAAAGAACCGTGAACTGGCAGCACAGA
GCCCAGCAACTGCTTTCGTCAGGGAATCTTAAATTTGTGCAAGATCGAGTGGGCTCAGGACTGTTATATA
GCAGATGGCAAGCCTCAGCAGGACAGGTGTCAGACACAAACAAGGTATCTCAACCTCCTGGCACAACATC
ATTTTCTTTGCCTGATGACTGGGACAACAGAACCTCATATTTGCACTCCCCCTTCTCAACTGGACGAAGT
TGTATCCCCCTCCATGGTGTTAGTCCAGAAGTGAATGAACTATTGATGGAAGCCCAGCTGCTCCAGGTAT
CCCTTCCTGAAATTCAGGAACTTTACCAGACTTTACTTGCAAAGCCAAGCCCTGCTCAGCAGACTGACCG
AAGCTCACCAGTGAGACCCAGCAGTGAGAAGAATGACTGTTGCCGAGGGAAGCGAGATGGAATTAACAGT
CTTGAGAGAAAACTGAAGAGACGCCTGGAAAGAGAGGGCCTCTCCAGTGAGCGGTGGGAACGAGTTAAGA
AAATGCGGACCCCCAAAAAGAAGAAAATCAAACTGAGCCACCCCAAGGACATGAACAATTTCAAGTTAGA
GAGAGAGCGTAGCTATGAATTAGTTCGTTCTGCTGAAACTCATTCCCTGCCCTCAGACACATCCTATTCC
GAACAGGAAGACTCTGAGGATGAAGATGCCATCTGCCCAGCTGTGAGCTGCCTGCAGCCAGAAGGAGATG
AGGTGGACTGGGTCCAGTGTGATGGCAGCTGCAATCAGTGGTTTCATCAGGTCTGTGTTGGTGTCTCCCC
AGAGATGGCAGAGAAAGAAGACTACATCTGTGTGCGCTGTACTGTGAAGGACGCACCAAGCCGAAAGTAA

Translation (1539 aa):
MEAATTLHPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKDWQPPFA
CDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVERKILDLFQLNKLVAEEGGFAV
VCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQ
RQSVQPSETCPPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQEPIERK
DYIVENEKEKPKSRSKKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPK
CLAQECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEY
GADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSS
FCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHE
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICK
MASKADVLDVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAIS
CSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKS
LVSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQF
VTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLE
QARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPRH
SLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRVPVLDTLIELVTRGRSIPVHLNS
LPRLETLVAEVQAWKECAVNTFLTENSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPNGKKKSTKLESL
SDLERALTESKETASAMATLGEARLREMEALQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPMIQCELC
RDAFHTSCVAVPSISQGLRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHR
AQQLLSSGNLKFVQDRVGSGLLYSRWQASAGQVSDTNKVSQPPGTTSFSLPDDWDNRTSYLHSPFSTGRS
CIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTLLAKPSPAQQTDRSSPVRPSSEKNDCCRGKRDGINS
LERKLKRRLEREGLSSERWERVKKMRTPKKKKIKLSHPKDMNNFKLERERSYELVRSAETHSLPSDTSYS
EQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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