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Report for CCDS86137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86137.1 Public Homo sapiens 10 TWNK 24 110 108 CCDS HistoryNCBI Gene:56652Re-query CCDS DB by CCDS ID:86137.1Re-query CCDS DB by GeneID:56652See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86137.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000476766.5 ENSP00000496012.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000476766.5Link to Ensembl Protein Viewer:ENSP00000496012.1Re-query CCDS DB by Nucleotide ID:ENST00000476766Re-query CCDS DB by Protein ID:ENSP00000496012
Original member Current member NCBI NM_001163814.2 NP_001157286.1 Accepted alive Link to Nucleotide Sequence:NM_001163814.2Link to Protein Sequence:NP_001157286.1Re-query CCDS DB by Nucleotide ID:NM_001163814Re-query CCDS DB by Protein ID:NP_001157286Link to BLAST:NP_001157286.1

Chromosomal Locations for CCDS 86137.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 100989763 100989884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100990436 100990543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100990869 100991025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGCTGACACAGTTTGCCGAGGGGCGGCTGGAAGATCAACTGGACAAATATGATCACTGGGCTGACCGCT
TTGAGGACCTGCCCCTCTATTTCATGACTTTCCATGGACAGCAAAGCATCAGGACTGTAATAGATACAAT
GCAACATGCAGTCTACGTCTATGACATTTGTCATGTGATCATCGACAACCTGCAGTTCATGATGGGTCAC
GAGCAGCTGTCCACAGACAGGATCGCAGCTCAAGACTACATCATCGGGGTCTTTCGGAAGTTTGCAACAG
ACAATAACTGCCATGTGACACTGGTCATTCACCCCCGGAAAGAGGATGATGACAAGGAACTGCAGACAGC
GTCCATTTTTGGCTCAGCCAAAGTGAGTGGCCTTTAG

Translation (128 aa):
MLTQFAEGRLEDQLDKYDHWADRFEDLPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVIIDNLQFMMGH
EQLSTDRIAAQDYIIGVFRKFATDNNCHVTLVIHPRKEDDDKELQTASIFGSAKVSGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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