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Report for CCDS8119.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8119.1 Public Homo sapiens 11 FIBP 24 110 108 CCDS HistoryNCBI Gene:9158Re-query CCDS DB by CCDS ID:8119.1Re-query CCDS DB by GeneID:9158See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8119.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338369.6 ENSP00000344572.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338369.6Link to Ensembl Protein Viewer:ENSP00000344572.2Re-query CCDS DB by Nucleotide ID:ENST00000338369Re-query CCDS DB by Protein ID:ENSP00000344572
Original member Current member NCBI NM_198897.2 NP_942600.1 Accepted alive Link to Nucleotide Sequence:NM_198897.2Link to Protein Sequence:NP_942600.1Re-query CCDS DB by Nucleotide ID:NM_198897Re-query CCDS DB by Protein ID:NP_942600Link to BLAST:NP_942600.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_942600.1 364 O43427-1 364 100% 0 0

Chromosomal Locations for CCDS 8119.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65883974 65884043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65884392 65884489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65884570 65884656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65884935 65884998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65885078 65885186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65885509 65885663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65886322 65886422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65887600 65887726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65887934 65888132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65888334 65888418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGACCAGTGAGCTGGACATCTTCGTGGGGAACACGACCCTTATCGACGAGGACGTGTATCGCCTCTGGC
TCGATGGTTACTCGGTGACCGACGCGGTGGCCCTGCGGGTGCGCTCGGGAATCCTGGAGCAGACTGGCGC
CACGGCAGCGGTGCTGCAGAGCGACACCATGGACCATTACCGCACCTTCCACATGCTCGAGCGGCTGCTG
CATGCGCCGCCCAAGCTACTGCACCAGCTCATCTTCCAGATTCCGCCCTCCCGGCAGGCACTACTCATCG
AGAGGTACTATGCCTTTGATGAGGCCTTTGTTCGGGAGGTGCTGGGCAAGAAGCTGTCCAAAGGCACCAA
GAAAGACCTGGATGACATCAGCACCAAAACAGGCATCACCCTCAAGAGCTGCCGGAGACAGTTTGACAAC
TTTAAACGGGTCTTCAAGGTGGTAGAGGAAATGCGGGGCTCCCTGGTGGACAATATTCAGCAACACTTCC
TCCTCTCTGACCGGTTGGCCAGGGACTATGCAGCCATCGTCTTCTTTGCTAACAACCGCTTTGAGACAGG
GAAGAAAAAACTGCAGTATCTGAGCTTCGGTGACTTTGCCTTCTGCGCTGAGCTCATGATCCAAAACTGG
ACCCTTGGAGCCGTCGGTGAGGCCCCCACTGACCCAGACTCACAGATGGATGACATGGACATGGACTTAG
ACAAGGAATTTCTCCAGGACTTGAAGGAGCTCAAGGTGCTAGTGGCTGACAAGGACCTTCTGGACCTGCA
CAAGAGCCTGGTGTGCACTGCTCTCCGGGGAAAGCTGGGCGTCTTCTCTGAGATGGAAGCCAACTTCAAG
AACCTGTCCCGGGGGCTGGTGAACGTGGCCGCCAAGCTGACCCACAATAAAGATGTCAGAGACCTGTTTG
TGGACCTCGTGGAGAAGTTTGTGGAACCCTGCCGCTCCGACCACTGGCCACTCAGCGACGTGCGGTTCTT
CCTGAATCAGTATTCAGCGTCTGTCCACTCCCTCGATGGCTTCCGACACCAGGCCCTCTGGGACCGCTAC
ATGGGCACCCTCCGCGGCTGCCTCCTGCGCCTGTATCATGACTGA

Translation (364 aa):
MTSELDIFVGNTTLIDEDVYRLWLDGYSVTDAVALRVRSGILEQTGATAAVLQSDTMDHYRTFHMLERLL
HAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKKLSKGTKKDLDDISTKTGITLKSCRRQFDN
FKRVFKVVEEMRGSLVDNIQQHFLLSDRLARDYAAIVFFANNRFETGKKKLQYLSFGDFAFCAELMIQNW
TLGAVGEAPTDPDSQMDDMDMDLDKEFLQDLKELKVLVADKDLLDLHKSLVCTALRGKLGVFSEMEANFK
NLSRGLVNVAAKLTHNKDVRDLFVDLVEKFVEPCRSDHWPLSDVRFFLNQYSASVHSLDGFRHQALWDRY
MGTLRGCLLRLYHD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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