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Report for CCDS77815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77815.1 Public Homo sapiens 3 H1-8 24 110 108 CCDS HistoryNCBI Gene:132243Re-query CCDS DB by CCDS ID:77815.1Re-query CCDS DB by GeneID:132243See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77815.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000503977.1 ENSP00000422964.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000503977.1Link to Ensembl Protein Viewer:ENSP00000422964.1Re-query CCDS DB by Nucleotide ID:ENST00000503977Re-query CCDS DB by Protein ID:ENSP00000422964
Original member Current member NCBI NM_001308262.2 NP_001295191.1 Accepted alive Link to Nucleotide Sequence:NM_001308262.2Link to Protein Sequence:NP_001295191.1Re-query CCDS DB by Nucleotide ID:NM_001308262Re-query CCDS DB by Protein ID:NP_001295191Link to BLAST:NP_001295191.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295191.1 207 Q8IZA3-2 207 100% 0 0

Chromosomal Locations for CCDS 77815.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 129549040 129549364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129550745 129550809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129551107 129551340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGGCCCCCGCGACGGCTCCCAGGAGAGCGGGTGAGGCCAAGGGGAAGGGCCCCAAGAAACCAAGTGAGG
CCAAGGAGGACCCTCCCAACGTGGGCAAGGTGAAAAAGGCAGCCAAGAGGCCAGCAAAGGTGCAGAAGCC
TCCTCCCAAGCCAGGCGCAGCCACAGAGAAGGCTCGCAAGCAAGGCGGCGCGGCCAAGGACACCAGGGCA
CAGTCGGGAGAGGCTAGGAAGGTGCCCCCCAAGCCAGACAAGGCCATGCGGGCACCTTCCAGTGCTGGTG
GGCTCAGCAGGAAGGCAAAGGCCAAAGGCAGCAGGAGCAGCCAAGGAGATGCTGAGGCCTACAGGAAAAC
CAAAGCTGAGAGTAAGAGTTCAAAACCCACGGCCAGCAAGGTCAAGAATGGTGCTGCTTCCCCGACCAAA
AAGAAGGTGGTGGCCAAGGCCAAGGCCCCTAAAGCTGGGCAGGGGCCAAACACCAAGGCTGCTGCTCCTG
CTAAGGGCAGTGGGTCCAAGGTGGTACCTGCACATTTGTCCAGGAAGACAGAGGCCCCCAAGGGCCCTAG
AAAGGCTGGGCTGCCCATCAAGGCCTCATCATCCAAAGTGTCCAGCCAGAGGGCTGAAGCTTAG

Translation (207 aa):
MAPATAPRRAGEAKGKGPKKPSEAKEDPPNVGKVKKAAKRPAKVQKPPPKPGAATEKARKQGGAAKDTRA
QSGEARKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSSQGDAEAYRKTKAESKSSKPTASKVKNGAASPTK
KKVVAKAKAPKAGQGPNTKAAAPAKGSGSKVVPAHLSRKTEAPKGPRKAGLPIKASSSKVSSQRAEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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