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Report for CCDS7776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7776.1 Public Homo sapiens 11 NLRP14 24 110 108 CCDS HistoryNCBI Gene:338323Re-query CCDS DB by CCDS ID:7776.1Re-query CCDS DB by GeneID:338323See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7776.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299481.5 ENSP00000299481.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299481.5Link to Ensembl Protein Viewer:ENSP00000299481.5Re-query CCDS DB by Nucleotide ID:ENST00000299481Re-query CCDS DB by Protein ID:ENSP00000299481
Original member Current member NCBI NM_176822.4 NP_789792.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_176822.4Link to Protein Sequence:NP_789792.1Re-query CCDS DB by Nucleotide ID:NM_176822Re-query CCDS DB by Protein ID:NP_789792Link to BLAST:NP_789792.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789792.1 1093 Q86W24 1093 100% 0 0

Chromosomal Locations for CCDS 7776.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 7038587 7038875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7039714 7039785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7042388 7043984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7046668 7046832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7049671 7049838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7057677 7057847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7058280 7058450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7059894 7060064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7062333 7062503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7070286 7070456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7071173 7071308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3282 nt):
ATGGCAGATTCATCATCATCTTCTTTCTTTCCTGATTTTGGGCTGCTATTGTATTTGGAGGAGCTAAACA
AA
GAGGAATTAAATACATTCAAGTTATTCCTAAAGGAGACCATGGAACCTGAGCATGGCCTGACACCCTG
G
AATGAAGTGAAGAAGGCCAGGCGGGAGGACCTGGCCAATTTGATGAAGAAATATTATCCAGGAGAGAAA
GCC
TGGAGTGTGTCTCTCAAAATCTTTGGCAAGATGAACCTGAAGGATCTGTGTGAGAGAGCGAAAGAAG
AG
ATCAACTGGTCGGCCCAGACTATAGGACCAGATGATGCCAAGGCTGGAGAGACACAAGAAGATCAGGA
G
GCAGTGCTGGGTGATGGAACAGAATACAGAAATAGAATAAAGGAAAAATTTTGCATCACTTGGGACAAG
AAG
TCTTTGGCTGGAAAGCCTGAAGATTTCCATCATGGAATTGCAGAGAAAGATAGAAAACTGTTGGAAC
AC
TTGTTCGATGTGGATGTCAAAACCGGTGCACAGCCACAGATCGTGGTGCTTCAGGGAGCTGCTGGAGT
T
GGGAAAACAACCTTGGTGAGAAAGGCAATGTTAGATTGGGCAGAGGGCAGTCTCTACCAGCAGAGGTTT
AAG
TATGTTTTTTATCTCAATGGGAGAGAAATTAACCAGCTGAAAGAGAGAAGCTTTGCTCAATTGATAT
CA
AAGGACTGGCCCAGCACAGAAGGCCCCATTGAAGAAATCATGTACCAGCCAAGTAGCCTCTTGTTTAT
T
ATTGACAGTTTCGATGAACTGAACTTTGCCTTTGAAGAACCTGAGTTTGCACTGTGCGAAGACTGGACC
CAA
GAACACCCAGTGTCCTTCCTCATGAGTAGTTTGCTGAGGAAAGTGATGCTCCCTGAGGCATCCTTAT
TG
GTGACAACAAGACTCACAACTTCTAAGAGACTAAAGCAGTTGTTGAAGAATCACCATTATGTAGAGCT
A
CTAGGAATGTCTGAGGATGCAAGAGAGGAGTATATTTACCAGTTTTTTGAAGATAAGAGGTGGGCCATG
AAA
GTATTCAGTTCACTAAAAAGCAATGAGATGCTGTTTAGCATGTGCCAAGTCCCCCTAGTGTGCTGGG
CC
GCTTGTACTTGTCTGAAGCAGCAAATGGAGAAGGGTGGTGATGTCACATTGACCTGCCAAACAACCAC
A
GCTCTGTTTACCTGCTATATTTCTAGCTTGTTCACACCAGTAGATGGAGGCTCTCCTAGTCTACCCAAC
CAA
GCCCAGCTGAGAAGACTGTGCCAAGTCGCTGCCAAAGGAATATGGACTATGACTTACGTGTTTTACA
GA
GAAAATCTCAGAAGGCTTGGGTTAACTCAATCTGATGTCTCTAGTTTTATGGACAGCAATATTATTCA
G
AAGGACGCAGAGTATGAAAACTGCTATGTGTTCACCCACCTTCATGTTCAGGAGTTTTTTGCAGCTATG
TTC
TATATGTTGAAAGGCAGTTGGGAAGCTGGGAACCCTTCCTGCCAGCCTTTTGAAGATTTGAAGTCAT
TA
CTTCAAAGCACAAGTTATAAAGACCCCCATTTGACACAGATGAAGTGCTTTTTGTTTGGCCTTTTGAA
T
GAAGATCGAGTAAAACAACTGGAGAGGACTTTTAACTGTAAAATGTCACTGAAGATAAAATCAAAGTTA
CTT
CAGTGTATGGAAGTATTAGGAAACAGTGACTATTCTCCATCACAGCTGGGATTTCTGGAGTTGTTTC
AC
TGTCTGTATGAGACTCAAGATAAAGCGTTTATAAGCCAGGCAATGAGATGTTTCCCAAAGGTTGCCAT
T
AATATTTGTGAGAAAATACATTTGCTTGTATCTTCTTTCTGCCTTAAGCACTGCCGGTGTTTGCGGACC
ATC
AGGCTGTCTGTAACTGTGGTATTTGAGAAGAAGATATTAAAAACAAGCCTCCCAACTAACACTTGGG
AT
GGTGATCGCATTACTCACTGTTGGCAAGATCTCTGTTCTGTGCTTCATACAAATGAACACTTGAGAGA
A
TTGGACCTGTACCATAGCAACCTTGATAAATCAGCAATGAATATCCTGCATCATGAACTAAGGCACCCA
AAC
TGTAAACTACAAAAGCTACTGTTGAAATTTATCACTTTCCCTGATGGTTGTCAGGATATCTCTACTT
CT
TTGATTCATAACAAGAATCTGATGCATCTTGACCTAAAAGGGAGTGATATAGGGGATAATGGAGTAAA
G
TCATTGTGTGAGGCCTTGAAACACCCAGAGTGTAAACTACAGACTCTCAGGCTGGAATCTTGCAACCTA
ACT
GTATTTTGTTGTCTAAATATATCTAATGCTCTCATCAGAAGCCAGAGCCTGATATTTCTGAATCTGT
CA
ACCAATAATCTGTTGGATGATGGAGTGCAGCTTTTGTGTGAGGCCTTAAGACATCCAAAGTGTTATCT
A
GAGAGACTGTCCTTAGAAAGCTGTGGTCTCACAGAGGCTGGCTGTGAGTATCTTTCTTTGGCTCTCATC
AGC
AATAAAAGACTGACACATTTGTGCTTGGCAGACAATGTCTTGGGTGATGGTGGAGTAAAGCTTATGA
GT
GATGCCCTGCAACATGCACAATGTACTCTGAAGAGCCTTGTGCTGAGGCGTTGCCATTTCACTTCACT
T
AGCAGTGAATATCTGTCAACTTCTCTTCTACACAACAAGAGCCTGACGCATCTGGATCTAGGATCAAAC
TGG
CTACAAGACAATGGAGTGAAGCTTCTGTGTGATGTCTTTCGGCATCCAAGCTGTAATCTTCAGGACT
TG
GAATTGATGGGCTGTGTTCTCACTAATGCATGTTGTCTGGATCTGGCTTCTGTTATTTTGAATAACCC
A
AACCTGAGGAGCCTGGACCTTGGGAACAACGATTTGCAGGATGATGGAGTGAAAATTCTGTGTGATGCT
TTG
AGATATCCAAACTGTAACATTCAGAGGCTCGGGTTGGAATACTGTGGTTTGACATCTCTCTGCTGTC
AA
GATCTCTCCTCTGCTCTTATCTGCAACAAAAGACTGATAAAAATGAATCTGACACAGAATACCTTAGG
A
TATGAAGGAATTGTGAAGTTATATAAAGTCTTGAAGTCTCCTAAGTGTAAACTACAAGTTCTAGGGTTG
TGC
AAAGAGGCATTTGATGAGGAAGCCCAGAAGCTGCTGGAAGCTGTGGGAGTTAGCAATCCACACTTAA
TC
ATTAAGCCAGATTGTAACTATCATAATGAAGAAGATGTGTCTTGGTGGTGGTGTTTCTGA


Translation (1093 aa):
MADSSSSSFFPDFGLLLYLEELNKEELNTFKLFLKETMEPEHGLTPWNEVKKARREDLANLMKKYYPGEK
A
WSVSLKIFGKMNLKDLCERAKEEIN
WSAQTIGPDDAKAGETQEDQEAVLGDGTEYRNRIKEKFCITWDK
K
SLAGKPEDFHHGIAEKDRKLLEHLFDVDVKTGAQPQIVVLQGAAGVGKTTLVRKAMLDWAEGSLYQQRF
K
YVFYLNGREINQLKERSFAQLISKDWPSTEGPIEEIMYQPSSLLFIIDSFDELNFAFEEPEFALCEDWT
Q
EHPVSFLMSSLLRKVMLPEASLLVTTRLTTSKRLKQLLKNHHYVELLGMSEDAREEYIYQFFEDKRWAM
K
VFSSLKSNEMLFSMCQVPLVCWAACTCLKQQMEKGGDVTLTCQTTTALFTCYISSLFTPVDGGSPSLPN
Q
AQLRRLCQVAAKGIWTMTYVFYRENLRRLGLTQSDVSSFMDSNIIQKDAEYENCYVFTHLHVQEFFAAM
F
YMLKGSWEAGNPSCQPFEDLKSLLQSTSYKDPHLTQMKCFLFGLLNEDRVKQLERTFNCKMSLKIKSKL
L
QCMEVLGNSDYSPSQLGFLELFHCLYETQDKAFISQAMRCFPKVAINICEKIHLLVSSFCLKHCRCLRT
I
RLSVTVVFEKKILKTSLPTNT
WDGDRITHCWQDLCSVLHTNEHLRELDLYHSNLDKSAMNILHHELRHP
N
CKLQKL
LLKFITFPDGCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNL
T
VFCCLNISNALIRSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERL
SLESCGLTEAGCEYLSLALI
S
NKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSL
VLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN
W
LQDNGVKLLCDVFRHPSCNLQDL
ELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDGVKILCDA
L
RYPNCNIQRL
GLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGL
C
KEAFDEEAQKLLEAVGVSNPHLIIKPDCNYHNEEDVSWWWCF




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser