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Report for CCDS76133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76133.1 Public Homo sapiens 1 ZBTB8A 24 110 108 CCDS HistoryNCBI Gene:653121Re-query CCDS DB by CCDS ID:76133.1Re-query CCDS DB by GeneID:653121See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76133.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316459.4 ENSP00000317561.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316459.4Link to Ensembl Protein Viewer:ENSP00000317561.4Re-query CCDS DB by Nucleotide ID:ENST00000316459Re-query CCDS DB by Protein ID:ENSP00000317561
Original member Current member NCBI NM_001291496.2 NP_001278425.1 Accepted alive Link to Nucleotide Sequence:NM_001291496.2Link to Protein Sequence:NP_001278425.1Re-query CCDS DB by Nucleotide ID:NM_001291496Re-query CCDS DB by Protein ID:NP_001278425Link to BLAST:NP_001278425.1

Chromosomal Locations for CCDS 76133.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32592932 32593754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32595054 32595223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32600268 32600297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1023 nt):
ATGGAGATCTCCTCTCATCAGTCTCACCTCCTGCAGCAACTGAACGAGCAGCGCAGGCAAGATGTATTTT
GTGACTGCAGTATTCTAGTTGAAGGGAAGGTCTTCAAAGCACATCGAAATGTATTATTCGCTAGTAGCGG
CTACTTTAAAATGCTTCTTTCTCAGAATTCAAAGGAGACGAGTCAGCCAACCACAGCTACATTTCAGGCT
TTCTCCCCTGACACTTTTACAGTTATCTTGGACTTCGTATATTCTGGCAAACTGTCTCTTACTGGTCAGA
ATGTCATAGAAGTGATGTCGGCTGCTAGCTTCCTTCAGATGACTGATGTCATAAGTGTATGTAAGACTTT
TATTAAATCTTCCTTAGACATTAGTGAGAAAGAAAAAGATCGCTATTTCAGTCTCTCAGATAAAGATGCC
AATTCTAATGGTGTAGAACGTTCCTCTTTTTATAGTGGTGGCTGGCAAGAAGGAAGCAGTTCTCCACGTT
CTCACCTAAGCCCAGAGCAAGGAACAGGTATAATAAGTGGAAAATCTTGGAATAAGTATAATTATCATCC
AGCCTCCCAGAAGAATACTCAACAACCCTTGGCCAAGCATGAACCAAGGAAAGAGTCCATTAAAAAGACC
AAACATTTGAGATTGTCACAGCCTTCTGAAGTTACTCATTATAAGTCAAGCAAACGAGAAGTACGAACAT
CTGATTCTTCCAGCCATGTTTCCCAGTCTGAAGAACAAGCACAGATTGATGCTGAAATGGACTCTACTCC
TGTTGGCTATCAGTACGGTCAAGGATCTGATGTCACATCCAAAAGCTTTCCAGATGATCTGCCTCGGATG
CGATTCAAGTGCCCGTACTGCACACATGTGGTGAAGCGGAAGGCAGACCTAAAGCGCCACCTTCGTTGTC
ATACAGGAGAAAGGCCCTATCCATGTCAAGCTTGTGGAAAAAGATTTAGCAGGCTAGACCATCTAAGTAG
CCATTTTCGAACAATGGAGATAAGGATTCCAGATGGCACTTGA

Translation (340 aa):
MEISSHQSHLLQQLNEQRRQDVFCDCSILVEGKVFKAHRNVLFASSGYFKMLLSQNSKETSQPTTATFQA
FSPDTFTVILDFVYSGKLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSLDISEKEKDRYFSLSDKDA
NSNGVERSSFYSGGWQEGSSSPRSHLSPEQGTGIISGKSWNKYNYHPASQKNTQQPLAKHEPRKESIKKT
KHLRLSQPSEVTHYKSSKREVRTSDSSSHVSQSEEQAQIDAEMDSTPVGYQYGQGSDVTSKSFPDDLPRM
RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTMEIRIPDGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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