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Report for CCDS589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
589.1 Public Homo sapiens 1 MRPL37 24 110 108 CCDS HistoryNCBI Gene:51253Re-query CCDS DB by CCDS ID:589.1Re-query CCDS DB by GeneID:51253See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 589.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360840.9 ENSP00000354086.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360840.9Link to Ensembl Protein Viewer:ENSP00000354086.5Re-query CCDS DB by Nucleotide ID:ENST00000360840Re-query CCDS DB by Protein ID:ENSP00000354086
Original member Current member NCBI NM_016491.4 NP_057575.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016491.4Link to Protein Sequence:NP_057575.2Re-query CCDS DB by Nucleotide ID:NM_016491Re-query CCDS DB by Protein ID:NP_057575Link to BLAST:NP_057575.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057575.2 423 Q9BZE1 423 100% 0 0

Chromosomal Locations for CCDS 589.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54200244 54200589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54205018 54205201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54205295 54205410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54209946 54210131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54212501 54212658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54216141 54216344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54218172 54218249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGGCATTGGCGTCCGGGCCCGCAAGGCGGGCGCTAGCTGGCTCCGGGCAGCTCGGCCTTGGGGGCTTCG
GGGCCCCGAGACGCGGGGCGTATGAGTGGGGCGTGCGCTCCACGCGGAAGTCGGAGCCTCCTCCCCTGGA
TAGGGTGTACGAGATCCCTGGACTGGAGCCCATCACCTTTGCGGGGAAGATGCACTTCGTGCCCTGGCTG
GCGCGGCCGATCTTTCCGCCCTGGGACCGCGGCTACAAGGACCCAAGGTTCTACCGCTCGCCCCCTCTTC
ACGAGCATCCGCTGTACAAAGACCAGGCCTGCTATATCTTTCACCACCGTTGCCGCCTTCTCGAGGGTGT
AAAGCAGGCCCTCTGGCTCACCAAGACCAAGTTAATAGAAGGCCTTCCCGAGAAAGTGCTTAGCCTTGTT
GATGATCCAAGGAACCACATAGAGAACCAAGACGAGTGCGTTCTGAATGTGATCTCTCACGCCCGTCTCT
GGCAGACCACTGAGGAAATCCCCAAGAGAGAGACCTACTGCCCGGTCATCGTGGACAACCTAATACAGCT
GTGTAAATCTCAGATTCTCAAGCATCCTTCTCTGGCCAGGAGGATCTGTGTCCAAAACTCCACGTTTTCT
GCTACCTGGAACCGAGAGTCTCTTCTCCTTCAAGTCCGTGGTTCTGGTGGAGCCCGACTGAGCACTAAGG
ATCCTCTGCCCACCATCGCCTCCAGAGAGGAGATTGAAGCTACTAAGAATCATGTTCTAGAGACCTTCTA
CCCCATATCACCCATCATCGATCTTCATGAATGCAATATTTATGATGTGAAAAATGACACAGGATTCCAG
GAAGGCTATCCTTACCCCTATCCCCATACCCTGTACTTACTGGACAAAGCCAATTTACGACCACACCGCC
TTCAACCAGATCAGCTGCGGGCCAAGATGATCCTGTTTGCTTTTGGCAGTGCCCTGGCTCAGGCCCGGCT
CCTCTATGGGAATGATGCCAAGGTCTTGGAGCAGCCCGTGGTGGTGCAGAGCGTGGGCACGGATGGACGT
GTCTTCCATTTCCTAGTGTTTCAACTGAATACCACAGACCTGGACTGTAACGAGGGTGTCAAGAATTTGG
CCTGGGTGGACTCAGACCAGCTCCTCTATCAGCATTTTTGGTGTCTCCCAGTGATCAAAAAGAGAGTGGT
TGTGGAACCTGTTGGCCCAGTTGGTTTCAAGCCAGAGACATTCAGAAAGTTTTTAGCTCTATATTTGCAT
GGTGCTGCGTGA

Translation (423 aa):
MALASGPARRALAGSGQLGLGGFGAPRRGAYEWGVRSTRKSEPPPLDRVYEIPGLEPITFAGKMHFVPWL
ARPIFPPWDRGYKDPRFYRSPPLHEHPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEGLPEKVLSLV
DDPRNHIENQDECVLNVISHARLWQTTEEIPKRETYCPVIVDNLIQLCKSQILKHPSLARRICVQNSTFS
ATWNRESLLLQVRGSGGARLSTKDPLPTIASREEIEATKNHVLETFYPISPIIDLHECNIYDVKNDTGFQ
EGYPYPYPHTLYLLDKANLRPHRLQPDQLRAKMILFAFGSALAQARLLYGNDAKVLEQPVVVQSVGTDGR
VFHFLVFQLNTTDLDCNEGVKNLAWVDSDQLLYQHFWCLPVIKKRVVVEPVGPVGFKPETFRKFLALYLH
GAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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