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Report for CCDS56231.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56231.1 Public Homo sapiens 22 SUN2 24 110 108 CCDS HistoryNCBI Gene:25777Re-query CCDS DB by CCDS ID:56231.1Re-query CCDS DB by GeneID:25777See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56231.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405018.5 ENSP00000385616.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405018.5Link to Ensembl Protein Viewer:ENSP00000385616.1Re-query CCDS DB by Nucleotide ID:ENST00000405018Re-query CCDS DB by Protein ID:ENSP00000385616
Original member Current member NCBI NM_001199579.2 NP_001186508.1 Accepted alive Link to Nucleotide Sequence:NM_001199579.2Link to Protein Sequence:NP_001186508.1Re-query CCDS DB by Nucleotide ID:NM_001199579Re-query CCDS DB by Protein ID:NP_001186508Link to BLAST:NP_001186508.1
Original member Current member NCBI NM_001394428.1 NP_001381357.1 Accepted alive Link to Nucleotide Sequence:NM_001394428.1Link to Protein Sequence:NP_001381357.1Re-query CCDS DB by Nucleotide ID:NM_001394428Re-query CCDS DB by Protein ID:NP_001381357Link to BLAST:NP_001381357.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186508.1 738 Q9UH99-2 738 100% 0 0
NP_001381357.1 738 Q9UH99-2 738 100% 0 0

Chromosomal Locations for CCDS 56231.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 38736267 38736380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38738173 38738265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38738587 38738754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38738873 38738988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38739342 38739426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38739722 38739943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38740267 38740432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38741007 38741050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38741494 38741571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38742301 38742555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38745684 38745811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38748713 38748783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38749766 38749859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38750225 38750383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38750898 38751035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38751210 38751373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38752507 38752628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGTCCCGAAGAAGCCAGCGCCTCACGCGCTACTCCCAGGGTGACGATGACGGCAGCAGCAGCAGCGGAG
GGAGCTCGGTGGCTGGGAGTCAGAGCACCCTGTTTAAAGACAGTCCTCTCAGGACCTTGAAGAGGAAATC
CAGCAACATGAAGCGCCTGTCCCCAGCGCCACAGCTGGGCCCGTCCTCTGATGCACACACCTCCTACTAC
AGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCA
ACTGGGGTGAGGACCTGCGGGTGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGG
GCTTGTGGGGCGCAAGGCCACCGAGGACTTCCTGGGCTCTTCCTCGGGCTACTCCTCTGAGGACGACTAC
GTGGAAGACAGTGAAGGAAGAGGCTCGAAAGTGACAGAGACTGAGCCAGTGTCCTCGTTCCCCGCAGGCT
ACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAAGCGCCGTCTCACGGGCGGGCTCCTTACT
CTGGATGGTGGCCACTTCGCCAGGCCGGCTCTTCAGACTTCTCTACTGGTGGGCTGGCACCACCTGGTAC
CGCCTGACCACAGCTGCCTCCCTCCTTGACGTCTTCGTTTTAACCAGGCGCTTCTCGTCCCTGAAGACGT
TCCTCTGGTTCCTGCTGCCGCTGCTCTTGCTGACGTGCCTGACGTATGGTGCTTGGTATTTCTACCCCTA
TGGGCTGCAGACATTCCACCCTGCTTTGGTTTCCTGGTGGGCAGCGAAGGACAGCAGGAGGCCGGATGAG
GGCTGGGAAGCCAGAGACTCATCGCCACATTTCCAGGCTGAGCAGCGTGTTATGTCCCGGGTACACTCTC
TGGAGCGGCGTCTGGAAGCTCTTGCTGCTGAATTTTCCTCCAACTGGCAGAAGGAGGCCATGCGGCTGGA
ACGTCTGGAGCTGCGGCAAGGGGCTCCTGGCCAGGGAGGTGGTGGTGGCCTGAGCCACGAGGACACCCTG
GCGCTGCTGGAGGGGCTAGTGAGCCGCCGTGAAGCTGCCCTGAAGGAGGATTTCCGCAGGGAAACTGCTG
CTCGCATCCAGGAAGAACTGTCTGCCCTGAGAGCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAGAA
GATCGTCCGGGCCTCCCAGGAGTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTGGCAAAGCATGACC
CAGGAGTCCTTCCAGGAGAGCTCTGTGAAGGAGCTGAGGCGGCTGGAGGACCAGCTGGCCGGCCTGCAGC
AGGAGCTGGCGGCTCTGGCACTGAAGCAGAGCTCGGTGGCGGAAGAAGTGGGCCTGCTGCCCCAGCAGAT
CCAGGCCGTGCGGGACGACGTGGAATCTCAGTTCCCGGCCTGGATCAGTCAGTTCCTTGCCCGAGGTGGA
GGGGGCCGCGTGGGGCTCCTTCAGAGAGAGGAGATGCAAGCTCAGCTGCGAGAGCTGGAGAGCAAGATCC
TCACCCATGTGGCAGAGATGCAGGGCAAGTCGGCCAGGGAAGCCGCGGCCTCCCTGAGCCTGACGCTGCA
GAAAGAAGGTGTGATTGGAGTGACAGAGGAGCAGGTGCACCACATCGTGAAGCAGGCCCTGCAGCGCTAC
AGTGAGGACCGCATCGGGCTGGCAGACTACGCCCTGGAGTCAGGAGGGGCCAGCGTCATCAGCACCCGAT
GTTCTGAGACCTACGAGACCAAGACGGCCCTCCTCAGCCTCTTCGGCATCCCCCTGTGGTACCACTCCCA
GTCACCCCGAGTCATCCTCCAGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGC
TTCGCCGTGGTCCGCCTCTCTGCCCGCATCCGCCCCACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCT
TGTCACCCAACAGCACTATCTCCAGTGCCCCCAAGGACTTCGCCATCTTTGGGTTTGACGAAGACCTGCA
GCAGGAGGGGACACTCCTTGGCAAGTTCACTTACGATCAGGACGGCGAGCCTATTCAGACGTTTCACTTT
CAGGCCCCTACGATGGCCACGTACCAGGTGGTGGAGCTGCGGATCCTGACTAACTGGGGCCACCCCGAGT
ACACCTGCATCTACCGCTTCAGAGTGCATGGGGAGCCCGCCCACTAG

Translation (738 aa):
MSRRSQRLTRYSQGDDDGSSSSGGSSVAGSQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYY
SESLVHESWFPPRSSLEELHGDANWGEDLRVRRRRGTGGSESSRASGLVGRKATEDFLGSSSGYSSEDDY
VEDSEGRGSKVTETEPVSSFPAGYSDVDQQSSSSRLRSAVSRAGSLLWMVATSPGRLFRLLYWWAGTTWY
RLTTAASLLDVFVLTRRFSSLKTFLWFLLPLLLLTCLTYGAWYFYPYGLQTFHPALVSWWAAKDSRRPDE
GWEARDSSPHFQAEQRVMSRVHSLERRLEALAAEFSSNWQKEAMRLERLELRQGAPGQGGGGGLSHEDTL
ALLEGLVSRREAALKEDFRRETAARIQEELSALRAEHQQDSEDLFKKIVRASQESEARIQQLKSEWQSMT
QESFQESSVKELRRLEDQLAGLQQELAALALKQSSVAEEVGLLPQQIQAVRDDVESQFPAWISQFLARGG
GGRVGLLQREEMQAQLRELESKILTHVAEMQGKSAREAAASLSLTLQKEGVIGVTEEQVHHIVKQALQRY
SEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQG
FAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHF
QAPTMATYQVVELRILTNWGHPEYTCIYRFRVHGEPAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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