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Report for CCDS55660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55660.1 Public Homo sapiens 1 KIFAP3 24 110 108 CCDS HistoryNCBI Gene:22920Re-query CCDS DB by CCDS ID:55660.1Re-query CCDS DB by GeneID:22920See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367765.5 ENSP00000356739.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367765.5Link to Ensembl Protein Viewer:ENSP00000356739.1Re-query CCDS DB by Nucleotide ID:ENST00000367765Re-query CCDS DB by Protein ID:ENSP00000356739
Original member Current member NCBI NM_001204517.2 NP_001191446.1 Accepted alive Link to Nucleotide Sequence:NM_001204517.2Link to Protein Sequence:NP_001191446.1Re-query CCDS DB by Nucleotide ID:NM_001204517Re-query CCDS DB by Protein ID:NP_001191446Link to BLAST:NP_001191446.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191446.1 752 Q92845-3 752 100% 0 0

Chromosomal Locations for CCDS 55660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 169921676 169921781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169954011 169954110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169961046 169961235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169972513 169972598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169978085 169978183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169981972 169982097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169982702 169982867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169983270 169983382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169984582 169984690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169992155 169992255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170016462 170016624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170024418 170024596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170031886 170031984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170034372 170034496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170035454 170035553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170038290 170038431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170039233 170039288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170046712 170046866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170055305 170055348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2259 nt):
ATGGGGGACCCCATGTTGGGAGAACGAAAAGAATGTCAAAAAATCATTCGACTTAAGAGTCTCAATGCCA
ACACAGATATAACTTCCCTGGCAAGGAAGGTGGTTGAAGAATGTAAACTCATTCATCCTTCAAAACTAAA
TGAGGTAGAACAGCTGTTGTACTATCTACAGAACCGCCGTGATTCATTGTCAGGAAAAGAGAAAAAAGAA
AAATCAAGCAAGCCTAAAGATCCACCTCCTTTTGAAGGAATGGAGATTGATGAAGTTGCTAACATTAATG
ACATGGATGAATATATTGAGTTATTATATGAAGATATTCCTGACAAAGTTCGGGGTTCTGCTTTGATCCT
GCAGCTTGCTCGAAATCCTGATAACTTGGAAGAACTACTATTGAATGAAACTGCCCTTGGTGCATTAGCA
AGGGTCCTGAGAGAAGACTGGAAGCAAAGTGTCGAGTTAGCTACAAACATAATTTACATCTTTTTTTGTT
TCTCCAGCTTTTCTCAATTTCATGGACTTATTACTCACTATAAAATTGGAGCTCTGTGTATGAATATTAT
TGATCATGAGTTAAAAAGACATGAGCTTTGGCAAGAAGAACTCTCAAAGAAGAAGAAAGCTGTTGATGAA
GACCCTGAAAACCAAACCTTGAGAAAGGATTATGAAAAAACCTTTAAAAAGTACCAGGGGCTTGTGGTAA
AACAGGAACAGCTATTACGAGTTGCTCTTTATTTGCTTCTGAATCTTGCTGAGGATACTCGTACCGAACT
GAAAATGAGGAACAAGAACATAGTTCACATGTTGGTGAAAGCCCTTGATCGGGACAATTTTGAGCTGCTA
ATTTTAGTTGTGTCATTCTTGAAGAAACTCAGCATTTTTATGGAGAATAAAAATGATATGGTGGAAATGG
ATATTGTTGAAAAACTGGTGAAAATGATACCTTGTGAGCATGAAGACCTGCTGAATATCACCCTCCGACT
TTTACTAAACCTATCCTTTGACACAGGACTGAGGAATAAGATGGTACAAGTTGGACTGCTTCCCAAGCTC
ACTGCACTCCTAGGCAATGACAACTACAAACAAATAGCAATGTGTGTTCTTTACCACATAAGCATGGATG
ACCGCTTTAAATCAATGTTTGCATACACTGACTGTATACCACAGTTAATGAAGATGCTGTTTGAATGTTC
AGATGAACGAATTGACTTGGAACTCATTTCTTTCTGCATTAATCTTGCTGCTAACAAAAGAAATGTACAG
CTTATCTGTGAAGGAAATGGGCTGAAGATGCTCATGAAGAGGGCTCTGAAGTTTAAGGATCCATTGCTGA
TGAAAATGATTAGAAACATTTCTCAGCATGATGGACCAACTAAAAATCTGTTTATTGATTATGTTGGGGA
CCTTGCAGCCCAGATCTCTAATGATGAAGAAGAGGAGTTTGTGATTGAATGTTTGGGAACTCTTGCAAAC
TTGACCATTCCAGACTTAGACTGGGAATTGGTTCTTAAAGAATATAAGTTGGTTCCATACCTCAAGGATA
AACTAAAACCAGGTGCTGCAGAAGATGATCTTGTTTTAGAAGTGGTTATAATGATTGGAACTGTATCCAT
GGATGACTCTTGTGCTGCATTGCTAGCCAAATCTGGCATAATCCCTGCACTCATTGAATTGCTAAATGCT
CAACAAGAAGATGATGAATTTGTGTGTCAGATAATTTATGTCTTCTACCAGATGGTTTTCCACCAAGCCA
CAAGAGACGTCATAATCAAGGAAACACAGGCTCCAGCATATCTCATAGACCTAATGCATGATAAGAATAA
TGAAATCCGAAAGGTCTGTGATAATACATTAGATATTATAGCGGAATATGATGAAGAATGGGCTAAGAAA
ATTCAGAGTGAAAAGTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGTAGAGAGTCGTCAGATGGATG
AGAGTGAGCAGTACTTGTATGGTGATGATCGAATTGAGCCATACATTCATGAAGGAGATATTCTCGAAAG
ACCTGACCTTTTCTACAACTCAGATGGATTAATTGCCTCTGAAGGAGCCATAAGTCCCGATTTCTTCAAT
GATTACCACCTTCAAAATGGAGATGTTGTTGGGCAGCATTCATTTCCTGGCAGCCTTGGAATGGATGGCT
TTGGCCAACCAGTTGGCATTCTTGGACGCCCTGCCACAGCATATGGATTCCGCCCTGATGAACCTTACTA
CTATGGCTATGGATCTTGA

Translation (752 aa):
MGDPMLGERKECQKIIRLKSLNANTDITSLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKE
KSSKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKVRGSALILQLARNPDNLEELLLNETALGALA
RVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMNIIDHELKRHELWQEELSKKKKAVDE
DPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMRNKNIVHMLVKALDRDNFELL
ILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDLLNITLRLLLNLSFDTGLRNKMVQVGLLPKL
TALLGNDNYKQIAMCVLYHISMDDRFKSMFAYTDCIPQLMKMLFECSDERIDLELISFCINLAANKRNVQ
LICEGNGLKMLMKRALKFKDPLLMKMIRNISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECLGTLAN
LTIPDLDWELVLKEYKLVPYLKDKLKPGAAEDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNA
QQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDIIAEYDEEWAKK
IQSEKFRWHNSQWLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDLFYNSDGLIASEGAISPDFFN
DYHLQNGDVVGQHSFPGSLGMDGFGQPVGILGRPATAYGFRPDEPYYYGYGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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