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Report for CCDS47080.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47080.1 Public Homo sapiens 4 ART3 24 110 108 CCDS HistoryNCBI Gene:419Re-query CCDS DB by CCDS ID:47080.1Re-query CCDS DB by GeneID:419See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47080.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341029.9 ENSP00000343843.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341029.9Link to Ensembl Protein Viewer:ENSP00000343843.5Re-query CCDS DB by Nucleotide ID:ENST00000341029Re-query CCDS DB by Protein ID:ENSP00000343843
Original member Current member NCBI NM_001130017.3 NP_001123489.1 Accepted alive Link to Nucleotide Sequence:NM_001130017.3Link to Protein Sequence:NP_001123489.1Re-query CCDS DB by Nucleotide ID:NM_001130017Re-query CCDS DB by Protein ID:NP_001123489Link to BLAST:NP_001123489.1
Original member Current member NCBI NM_001377175.1 NP_001364104.1 Accepted alive Link to Nucleotide Sequence:NM_001377175.1Link to Protein Sequence:NP_001364104.1Re-query CCDS DB by Nucleotide ID:NM_001377175Re-query CCDS DB by Protein ID:NP_001364104Link to BLAST:NP_001364104.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123489.1 367 Q13508-2 367 100% 0 0
NP_001364104.1 367 Q13508-2 367 100% 0 0

Chromosomal Locations for CCDS 47080.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 76075890 76075958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76081824 76082535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76097644 76097676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76098955 76098987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76100291 76100320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76100795 76100824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76100990 76101019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76103937 76103969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 76112386 76112519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGAAGACGGGACATTTTGAAATAGTCACCATGCTGCTGGCAACCATGATTCTAGTGGACATTTTCCAGG
TGAAGGCTGAAGTGTTAGACATGGCAGATAATGCATTTGATGATGAATACCTGAAATGTACGGACAGGAT
GGAAATTAAATACGTTCCCCAACTGCTAAAGGAGGAAAAAGCAAGCCACCAGCAATTAGATACTGTGTGG
GAAAATGCAAAAGCCAAATGGGCAGCCCGAAAGACTCAAATCTTTCTCCCTATGAATTTTAAGGATAACC
ATGGAATAGCCCTGATGGCATATATTTCCGAAGCTCAAGAGCAAACTCCCTTTTACCATCTGTTCAGTGA
AGCTGTGAAGATGGCTGGCCAATCTCGAGAAGATTATATCTATGGCTTCCAGTTCAAAGCTTTCCACTTT
TACCTCACAAGAGCCCTGCAGTTGCTGAGAAAACCTTGTGAGGCCAGTTCCAAAACTGTGGTATATAGAA
CAAGCCAGGGCACTTCATTTACATTTGGAGGGCTAAACCAAGCCAGGTTTGGCCATTTTACCTTGGCATA
TTCAGCCAAACCTCAGGCTGCTAATGACCAGCTCACTGTGTTATCCATCTACACATGCCTTGGAGTTGAC
ATTGAAAATTTTCTTGATAAAGAAAGTGAAAGAATTACTTTAATACCTCTGAATGAGGTTTTTCAAGTGT
CACAGGAGGGGGCTGGCAATAACCTTATCCTTCAAAGCATAAACAAGACCTGCAGCCATTATGAGTGTGC
ATTTCTAGGTGGACTAAAAACCGAAAACTGTATTGAGAACCTAGAATATTTTCAACCCATCTATGTCTAC
AACCCTGGTGAGAAAAACCAGAAGCTTGAAGACCATAGTGAGAAAAACTGGAAGCTTGAAGACCATGGTG
AGAAAAACCAGAAGCTTGAAGACCATGGTGTGAAAATCCTTGAACCCACCCAAATACCTGCTCCAGGTCC
AGTTCCTGTTCCAGGTCCCAAAAGCCATCCTTCTGCATCCTCGGGCAAACTGCTGCTTCCACAGTTTGGG
ATGGTCATCATTTTAATCAGTGTTTCTGCTATAAATCTCTTTGTTGCTCTGTAG

Translation (367 aa):
MKTGHFEIVTMLLATMILVDIFQVKAEVLDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVW
ENAKAKWAARKTQIFLPMNFKDNHGIALMAYISEAQEQTPFYHLFSEAVKMAGQSREDYIYGFQFKAFHF
YLTRALQLLRKPCEASSKTVVYRTSQGTSFTFGGLNQARFGHFTLAYSAKPQAANDQLTVLSIYTCLGVD
IENFLDKESERITLIPLNEVFQVSQEGAGNNLILQSINKTCSHYECAFLGGLKTENCIENLEYFQPIYVY
NPGEKNQKLEDHSEKNWKLEDHGEKNQKLEDHGVKILEPTQIPAPGPVPVPGPKSHPSASSGKLLLPQFG
MVIILISVSAINLFVAL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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