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Report for CCDS41685.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41685.1 Public Homo sapiens 11 KRTAP5-11 24 110 108 CCDS HistoryNCBI Gene:440051Re-query CCDS DB by CCDS ID:41685.1Re-query CCDS DB by GeneID:440051See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41685.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398530.1 ENSP00000381541.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398530.1Link to Ensembl Protein Viewer:ENSP00000381541.1Re-query CCDS DB by Nucleotide ID:ENST00000398530Re-query CCDS DB by Protein ID:ENSP00000381541
Original member Current member NCBI NM_001005405.3 NP_001005405.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005405.3Link to Protein Sequence:NP_001005405.1Re-query CCDS DB by Nucleotide ID:NM_001005405Re-query CCDS DB by Protein ID:NP_001005405Link to BLAST:NP_001005405.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005405.1 156 Q6L8G4 156 100% 0 0

Chromosomal Locations for CCDS 41685.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 71582367 71582837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGGCTGCTGTGGCTGTTCTGGAGGCTGTGGCTCTGGCTGTGGGGGCTGTGGCTCCGGCAGTGGGGGCT
GTGGCTCTGGCTGTGGGGGCTGTGGCTCCAGCTGCTGTGTGCCCATTTGCTGCTGCAAGCCTGTGTGCTG
CTGTGTGCCAGCCTGTTCCTGCTCCAGCTGTGGCTCCTGTGGGGGCTCCAAAGGGGGCTGTGGCTCTTGT
GGGAGCTCCAAGGGTGGGTGTGGTTCTTGTGGCTGCTCCCAGTCCAACTGCTGTAAGCCCTGCTGCTCCT
CCTCAGGCTGTGGGTCATTCTGCTGCCAGTCCAGCTGCTCCAAACCCTGCTGCTGCCAATCCAGCTGCTG
CCAGTCCAGCTGCTGCAAGCCCTGCTGCTGCCAATCCAGCTGCTGCCAGTCTAGCTGCTTCAAGCCCTGC
TGCTGCCAGTCCAGCTGCTGTGTCCCCGTGTGCTGCCAGTGTAAGATCTGA

Translation (156 aa):
MGCCGCSGGCGSGCGGCGSGSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGCGSC
GSSKGGCGSCGCSQSNCCKPCCSSSGCGSFCCQSSCSKPCCCQSSCCQSSCCKPCCCQSSCCQSSCFKPC
CCQSSCCVPVCCQCKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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