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Report for CCDS33837.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33837.1 Public Homo sapiens 3 IQCB1 24 110 108 CCDS HistoryNCBI Gene:9657Re-query CCDS DB by CCDS ID:33837.1Re-query CCDS DB by GeneID:9657See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33837.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310864.11 ENSP00000311505.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310864.11Link to Ensembl Protein Viewer:ENSP00000311505.6Re-query CCDS DB by Nucleotide ID:ENST00000310864Re-query CCDS DB by Protein ID:ENSP00000311505
Original member Current member NCBI NM_001023570.4 NP_001018864.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001023570.4Link to Protein Sequence:NP_001018864.2Re-query CCDS DB by Nucleotide ID:NM_001023570Re-query CCDS DB by Protein ID:NP_001018864Link to BLAST:NP_001018864.2
Original member Current member NCBI NM_001319107.2 NP_001306036.1 Accepted alive Link to Nucleotide Sequence:NM_001319107.2Link to Protein Sequence:NP_001306036.1Re-query CCDS DB by Nucleotide ID:NM_001319107Re-query CCDS DB by Protein ID:NP_001306036Link to BLAST:NP_001306036.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018864.2 598 Q15051-1 598 100% 0 0
NP_001306036.1 598 Q15051-1 598 100% 0 0

Chromosomal Locations for CCDS 33837.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 121770345 121770574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121772557 121772713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121781743 121781874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121788284 121788432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121790073 121790215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121795457 121795566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121797118 121797227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121799196 121799374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121807344 121807443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121808916 121809009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121826051 121826180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121828470 121828632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 121828861 121828960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1797 nt):
ATGAAGCCAACAGGTACAGACCCAAGGATCTTATCTATAGCTGCTGAAGTTGCAAAAAGCCCTGAGCAGA
ATGTCCCTGTTATACTGTTGAAGTTAAAAGAAATAATAAACATCACACCTTTAGGAAGCTCAGAGTTGAA
GAAAATCAAACAAGATATATATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTAT
TCTCGAATCCAGGGTGGTTGGACTACAATTTCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGGCT
TGGAGCCAGGAGAAGATGCAGAGGAATTTTACAATGAATTACTTCCATCAGCTGCAGAAAATTTTCTAGT
TTTGGGGAGACAATTACAAACATGTTTTATCAATGCAGCTAAGGCTGAAGAAAAAGATGAATTACTACAC
TTTTTCCAAATTGTGACTGATTCTCTCTTCTGGCTTTTGGGAGGCCATGTTGAACTTATTCAGAATGTAC
TACAAAGTGATCATTTCTTACATTTACTGCAAGCTGACAATGTCCAAATAGGATCTGCAGTCATGATGAT
GCTACAGAATATACTACAGATCAACAGTGGTGATTTACTCAGAATAGGAAGAAAAGCCCTGTATTCAATT
TTAGATGAAGTTATTTTCAAGCTTTTTTCAACTCCTAGTCCAGTTATAAGAAGTACTGCTACAAAACTCC
TACTGTTGATGGCTGAATCCCATCAGGAAATTTTGATTTTACTGAGACAAAGTACCTGCTACAAAGGACT
CAGACGTCTACTAAGTAAACAGGAAACTGGGACTGAATTCAGTCAAGAACTTAGACAGCTTGTTGGCCTT
TTAAGCCCAATGGTCTATCAGGAAGTAGAAGAGCAGAAACTACATCAAGCAGCATGCTTGATTCAAGCCT
ATTGGAAGGGTTTTCAGACAAGAAAGAGATTAAAGAAGCTTCCATCTGCTGTGATTGCTTTGCAGAGGAG
TTTCAGATCCAAACGATCAAAGATGTTGCTGGAGATAAATAGGCAGAAGGAAGAAGAGGACCTCAAATTA
CAATTGCAACTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGCAGCTGAGTATGCTCGAAATAG
TTCATCCAGGTCAGGTGGAGAAACACTATCGGGAAATGGAAGAGAAATCAGCACTGATTATCCAGAAACA
TTGGAGAGGGTACAGGGAAAGGAAAAATTTTCACCAACAGAGGCAGTCTCTCATAGAGTATAAAGCAGCT
GTCACACTTCAAAGAGCAGCGCTTAAATTCCTAGCGAAGTGCCGTAAGAAAAAGAAACTATTTGCTCCTT
GGCGAGGACTCCAAGAACTCACTGATGCACGCCGAGTTGAACTGAAGAAACGAGTGGATGACTATGTCAG
AAGACATTTGGGCTCTCCAATGTCAGATGTGGTCAGTAGGGAGCTCCATGCCCAAGCTCAAGAACGACTG
CAACACTACTTTATGGGCAGGGCCCTAGAAGAGCGAGCCCAGCAGCACAGAGAAGCTCTGATAGCACAGA
TCAGCACCAACGTTGAACAGCTAATGAAGGCACCAAGTCTGAAGGAGGCAGAAGGGAAAGAACCTGAGCT
CTTCCTAAGTAGATCCAGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCATCTCACAACCCTGAAGCACATA
CAAGCACCCTGGTGGAAGAAGCTTGGAGAAGAATCTGGAGATGAGATTGATGTTCCAAAGGATGAGCTTA
GTATAGAATTAGAAAATTTATTCATTGGTGGAACCAAACCACCTTAG

Translation (598 aa):
MKPTGTDPRILSIAAEVAKSPEQNVPVILLKLKEIINITPLGSSELKKIKQDIYCYDLIQYCLLVLSQDY
SRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKAEEKDELLH
FFQIVTDSLFWLLGGHVELIQNVLQSDHFLHLLQADNVQIGSAVMMMLQNILQINSGDLLRIGRKALYSI
LDEVIFKLFSTPSPVIRSTATKLLLLMAESHQEILILLRQSTCYKGLRRLLSKQETGTEFSQELRQLVGL
LSPMVYQEVEEQKLHQAACLIQAYWKGFQTRKRLKKLPSAVIALQRSFRSKRSKMLLEINRQKEEEDLKL
QLQLQRQRAMRLSRELQLSMLEIVHPGQVEKHYREMEEKSALIIQKHWRGYRERKNFHQQRQSLIEYKAA
VTLQRAALKFLAKCRKKKKLFAPWRGLQELTDARRVELKKRVDDYVRRHLGSPMSDVVSRELHAQAQERL
QHYFMGRALEERAQQHREALIAQISTNVEQLMKAPSLKEAEGKEPELFLSRSRPVAAKAKQAHLTTLKHI
QAPWWKKLGEESGDEIDVPKDELSIELENLFIGGTKPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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