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Report for CCDS32135.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32135.1 Public Homo sapiens 14 ZC3H14 24 110 108 CCDS HistoryNCBI Gene:79882Re-query CCDS DB by CCDS ID:32135.1Re-query CCDS DB by GeneID:79882See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32135.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336693.8 ENSP00000338002.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336693.8Link to Ensembl Protein Viewer:ENSP00000338002.4Re-query CCDS DB by Nucleotide ID:ENST00000336693Re-query CCDS DB by Protein ID:ENSP00000338002
Original member Current member NCBI NM_207661.3 NP_997544.1 Accepted alive Link to Nucleotide Sequence:NM_207661.3Link to Protein Sequence:NP_997544.1Re-query CCDS DB by Nucleotide ID:NM_207661Re-query CCDS DB by Protein ID:NP_997544Link to BLAST:NP_997544.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997544.1 571 Q6PJT7-4 571 100% 0 0

Chromosomal Locations for CCDS 32135.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 88568062 88568153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88571084 88571124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88572030 88572225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88572578 88573007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88574693 88574853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88575840 88575940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88577985 88578140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88596734 88596808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88607243 88607363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88609267 88609403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88609712 88609803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88610834 88610940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88611745 88611751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGGATCTGTCCCTGTTTCTAGGGAACA
ACACAATTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTTCGCTCTGTTACAACTGAACCCTC
TAGTCTGAAGTCTTCTGATACCAACATCTTTGATAGTAACGTGCCTTCAAACAAGAGCAATTTCAGTCGG
GGAGATGAGAGGAGGCATGAAGCTGCAGTGCCACCACTTGCCATTCCTAGCGCGAGACCTGAAAAAAGAG
ATTCCAGAGTTTCTACAAGTTCGCAGGAGTCAAAAACCACAAATGTCAGACAGACTTACGATGATGGAGC
TGCAACCCGACTAATGTCAACAGTGAAACCTTTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATT
AAGCCAGAACCAGATGATCTCATTGACGAAGACCTCAACTTTGTGCAGGAGAATCCCTTATCTCAGAAAA
AACCTACAGTGACACTTACATATGGTTCTTCTCGCCCTTCTATTGAAATTTATCGACCACCTGCAAGTAG
AAATGCAGATAGTGGTGTTCATTTAAACAGGTTGCAATTTCAACAGCAGCAGAATAGTATTCATGCTGCC
AAGCAGCTTGATATGCAGAGTAGTTGGGTATATGAAACAGGACGTTTGTGTGAACCAGAGGTGCTTAACA
GCTTAGAAGAAACGTATAGTCCGTTCTTTAGAAACAACTCGGAGAAAATGAGTATGGAGGATGAAAACTT
TCGGAAGAGAAAGTTGCCTGTGGTAAGTTCAGTTGTTAAAGTAAAAAAATTCAATCATGATGGAGAAGAG
GAGGAAGAAGATGATGATTACGGGTCTCGAACAGGAAGCATCTCCAGCAGTGTGTCTGTGCCTGCAAAGC
CTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCTAACAAGAATCTGATTTTGAAGGCTATATCTGA
AGCTCAAGAATCCGTAACAAAAACAACTAACTACTCTACAGTTCCACAGAAACAGACACTTCCAGTTGCT
CCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGCAGAAGTGGTCCAGGGACAAAGTAGGACCCCCAGAA
TAAGTCCCCCCATTAAAGAAGAGGAAACAAAAGGAGATTCTGTAGAAAAAAATCAAGGAACTCAACAGAG
GCAATTATTATCCCGACTGCAAATCGACCCAGTAATGGCAGAAACTCTGCAGATGAGTCAAGCTGAGATG
AGTGAACTGAGTGTGGCACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAA
ATGGGGATGAGTGTGCCTACCATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGA
AAAATGTTTGTTTGTTCACCCAAATTGTAAATATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACT
CATGTGAGTAGAAGAATTCCAGTACTGTCTCCAAAACCAGCAGTTGCACCACCAGCACCACCTTCCAGTA
GTCAGCTCTGCCGTTACTTCCCTGCTTGTAAGAAGATGGAATGTCCCTTCTATCATCCAAAACATTGTAG
GTTTAACACTCAATGTACAAGACCGGACTGCACATTCTACCATCCCACCATTAATGTCCCACCACGACAT
GCCTTGAAATGGATTCGACCTCAAACCAGCGAATAG

Translation (571 aa):
MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSR
GDERRHEAAVPPLAIPSARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDI
KPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNSIHAA
KQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEE
EEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVA
PRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMSQAEM
SELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFT
HVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRH
ALKWIRPQTSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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