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Report for CCDS3027.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3027.1 Public Homo sapiens 3 KALRN 24 110 108 CCDS HistoryNCBI Gene:8997Re-query CCDS DB by CCDS ID:3027.1Re-query CCDS DB by GeneID:8997See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3027.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000240874.7 ENSP00000240874.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000240874.7Link to Ensembl Protein Viewer:ENSP00000240874.3Re-query CCDS DB by Nucleotide ID:ENST00000240874Re-query CCDS DB by Protein ID:ENSP00000240874
Original member Current member NCBI NM_003947.6 NP_003938.1 Accepted alive Link to Nucleotide Sequence:NM_003947.6Link to Protein Sequence:NP_003938.1Re-query CCDS DB by Nucleotide ID:NM_003947Re-query CCDS DB by Protein ID:NP_003938Link to BLAST:NP_003938.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003938.1 1663 O60229-2 1663 100% 0 0

Chromosomal Locations for CCDS 3027.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 124094838 124094904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124227990 124228064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124234829 124234943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124264498 124264690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124268743 124269255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124298791 124298913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124325980 124326171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124329861 124329992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124334265 124334495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124347143 124347265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124384845 124385036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124395135 124395343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124398697 124398871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124413470 124413665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124422812 124422978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124430656 124430775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124434307 124434525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124438888 124439037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124441945 124442059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124446161 124446276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124446763 124446885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124455177 124455359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124456610 124456728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124461890 124461956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124462524 124462633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124474663 124474732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124477245 124477334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124482808 124482900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124488204 124488315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124490694 124490884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124491323 124491424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124492740 124492882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124496311 124496413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124518400 124518462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4992 nt):
ATGACGGACCGCTTCTGGGACCAGTGGTATCTCTGGTATCTCCGCTTGCTCCGGCTGCTGGATCGAGGGT
CTTTTCGGAATGATGGTTTGAAAGCTTCTGATGTCCTTCCTATCCTAAAGGAAAAGGTGGCCTTCGTGTC
TGGGGGTCGTGATAAGCGAGGCGGACCCATCCTGACCTTCCCTGCTCGCAGCAATCATGACAGAATAAGA
CAGGAAGACCTGCGGAAACTCGTGACGTATTTGGCCAGCGTGCCAAGTGAGGACGTGTGCAAACGTGGCT
TCACTGTCATCATCGACATGCGGGGCTCCAAGTGGGACCTCATCAAGCCCCTCCTCAAAACGCTGCAGGA
AGCCTTTCCAGCTGAGATCCATGTGGCCCTCATCATTAAACCCGACAACTTCTGGCAGAAACAGAAGACC
AACTTTGGCAGCTCCAAATTCATCTTTGAGACGAGCATGGTATCTGTGGAGGGCCTCACAAAGCTGGTGG
ACCCCTCCCAGCTGACGGAGGAGTTTGATGGCTCCCTGGACTACAACCATGAGGAGTGGATCGAACTGCG
GCTCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCTCGAGGACCTCCAGGAGATG
CTAGCCCGGAAGGAGTTTCCTGTGGATGTGGAGGGCTCTCGGCGGCTCATTGACGAACACACACAGCTCA
AGAAAAAGGTGCTGAAGGCCCCTGTGGAGGAGCTGGACCGGGAGGGGCAGCGGCTGCTGCAGTGCATCCG
CTGCAGCGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTGACTTCCAGAGCCTGGTGCCCAAG
ATCACCAGTCTCCTGGACAAGCTGCACTCCACCCGGCAGCACCTGCACCAGATGTGGCATGTGCGCAAGC
TCAAGCTGGACCAGTGCTTTCAGCTGCGGCTCTTCGAGCAGGATGCTGAGAAGATGTTTGACTGGATAAG
CCACAACAAGGAGTTATTCCTCCAGAGCCACACGGAGATCGGAGTCAGCTACCAGTACGCCCTTGACCTC
CAGACGCAGCACAATCACTTTGCCATGAACTCCATGAATGCCTATGTCAACATCAACCGCATCATGTCCG
TGGCTTCCCGCCTCTCTGAGGCCGGTCATTATGCCTCACAACAAATCAAGCAGATCTCCACCCAGCTGGA
CCAGGAGTGGAAGAGCTTCGCTGCTGCCCTGGATGAACGCAGCACCATCCTCGCCATGTCTGCTGTGTTC
CACCAGAAGGCTGAGCAGTTCCTGTCGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGC
CATCCGAGATGCAAGACCTAGAGCTGGCAATCCACCACCACCAGACCTTGTATGAGCAGGTGACCCAAGC
CTACACAGAGGTCAGCCAGGATGGCAAAGCACTACTTGATGTGCTGCAGCGGCCCCTGAGCCCTGGGAAC
TCCGAATCCCTCACGGCCACAGCCAACTACTCCAAGGCAGTGCACCAGGTGCTGGACGTGGTGCATGAGG
TGTTACATCACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCAGCGGCTGCA
GCTCTGCGTCTTCCAGCAGGATGTACAGCAGGTGTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCTC
AGCAAACACACTGGAGTTGGGAAGTCCCTACATCGAGCCCGGGCCCTGCAGAAGAGGCATGATGACTTTG
AAGAGGTGGCTCAGAATACGTACACCAATGCGGACAAGCTCCTAGAAGCAGCAGAGCAGTTGGCTCAGAC
GGGGGAATGTGACCCCGAGGAGATCTACAAGGCAGCTCGACACCTGGAGGTGCGCATCCAAGACTTCGTG
CGCAGGGTGGAGCAGCGGAAGCTTCTCCTGGACATGTCTGTTTCCTTCCACACACACACCAAAGAGTTGT
GGACATGGATGGAAGACCTTCAGAAGGAGATGTTGGAGGATGTCTGTGCAGATTCTGTGGATGCAGTCCA
GGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGATGCCACACTCAATGTCATCAAGGAA
GGCGAAGACCTTATCCAGCAGCTCAGGTCAGCGCCTCCCTCCCTCGGGGAGCCCAGCGAGGCCAGGGACT
CGGCTGTGTCCAACAACAAAACACCCCACAGCAGCTCCATCAGCCACATCGAGTCGGTCCTGCAGCAGCT
TGATGATGCCCAGGTGCAGATGGAGGAGCTGTTCCACGAGCGGAAGATCAAGCTGGACATCTTCCTGCAA
CTGCGCATCTTTGAGCAGTACACCATCGAGGTGACAGCAGAGCTAGACGCCTGGAATGAAGACTTGCTTC
GGCAGATGAATGACTTCAACACAGAGGACCTAACCCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACG
GAAGCTAGCCATGAACAACATGACCTTTGAGGTTATCCAGCAGGGACAGGATCTGCACCAGTACATCACG
GAGGTCCAGGCATCAGGAATTGAGTTGATCTGTGAAAAAGACATTGATCTGGCAGCCCAGGTGCAAGAGT
TATTGGAATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTCATAAGCGGCTAGA
GCAGTGCCTCCAATTACGTCACCTCCAGGCTGAAGTCAAACAGGTTCTGGGATGGATCCGCAATGGAGAG
TCAATGCTCAACGCCAGCCTGGTCAATGCCAGCTCTTTGTCGGAAGCAGAGCAGCTGCAGCGGGAGCACG
AGCAGTTCCAACTGGCCATCGAGTCCCTCTTTCATGCCACTTCCTTGCAGAAGACGCACCAGAGTGCCCT
GCAGGTACAGCAGAAAGCCGAGGTGCTGCTCCAGGCCGGCCACTACGATGCCGATGCCATCCGGGAATGT
GCTGAGAAGGTGGCCCTCCACTGGCAGCAGCTCATGCTGAAGATGGAAGACCGGCTAAAATTGGTCAATG
CCTCTGTGGCCTTTTACAAAACTTCTGAACAGGTGTGTAGTGTCCTGGAGAGCTTAGAGCAAGAATACCG
GAGAGATGAGGACTGGTGTGGTGGACGAGATAAGCTGGGGCCAGCAGCAGAGATCGACCATGTCATTCCC
CTCATCAGCAAACATTTGGAACAAAAGGAGGCCTTTCTTAAGGCCTGCACCCTGGCTCGGCGGAATGCTG
AGGTGTTTCTCAAGTACATCCACAGGAACAACGTCAGCATGCCCAGTGTCGCCAGCCACACTCGGGGACC
CGAGCAACAAGTGAAAGCCATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGTGCTGCATTTCTGGACC
TTGAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGAGCGCAGCGCTAAGCAGGCGCTTG
ACTGGATCCAAGAAACAGGTGAATTTTACCTCTCAACACATACCTCCACTGGAGAGACCACAGAGGAGAC
TCAGGAACTGCTGAAAGAATATGGGGAATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGTGAAGCTT
CTGATTCAGCTGGCCGATAGCTTTGTGGAAAAAGGCCACATTCATGCCACGGAGATAAGGAAATGGGTGA
CCACGGTGGACAAGCACTACAGAGATTTCTCCCTGAGGATGGGAAAGTACCGATACTCACTGGAGAAAGC
CCTAGGAGTCAACACAGAGGATAATAAGGACCTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGG
GAGGTCAAGCTGCGGGACGCCAACCACGAAGTCAATGAAGAGAAGCGGAAGTCAGCCCGGAAGAAAGAAT
TTATTATGGCTGAACTACTCCAGACAGAGAAGGCTTATGTAAGGGATTTGCATGAGTGCTTAGAGACCTA
CCTGTGGGAAATGACCAGTGGTGTGGAGGAGATCCCCCCTGGGATCCTCAATAAAGAGCATATCATCTTT
GGCAACATCCAAGAGATCTACGATTTCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAAC
TGCCTGAGGATGTGGGACACTGCTTTGTTACCTGGGCAGACAAATTTCAGATGTATGTCACCTACTGTAA
AAACAAGCCTGATTCCAACCAGCTTATCCTGGAGCATGCGGGCACCTTCTTTGATGAGATACAACAGCGG
CATGGTCTGGCCAACTCCATCTCTTCCTACCTAATTAAGCCTGTCCAAAGGATCACCAAATATCAACTGC
TCCTGAAGGAACTTTTAACTTGCTGTGAAGAAGGGAAAGGGGAGCTCAAGGATGGCCTGGAGGTGATGCT
CAGTGTCCCAAAGAAAGCCAATGATGCCATGCATGTCAGCATGCTGGAAGGGTTCGACGAGAACCTGGAT
GTGCAGGGGGAGTTGATTCTCCAGGATGCCTTTCAAGTGTGGGACCCGAAGTCGCTGATCCGGAAGGGGC
GGGAGCGGCACTTGTTCCTCTTTGAGATCTCCTTGGTTTTTAGCAAGGAGATCAAAGATTCTTCAGGACA
CACGAAATATGTTTACAAGAACAAGCTACTGACCTCAGAGCTGGGTGTGACCGAGCACGTGGAGGGCGAT
CCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACAATAAAACAGTGCTGAAAGCCTCCA
ACATTGAAACCAAGCAGGAGTGGATCAAGAACATTCGAGAAGTGATTCAAGAAAGGATCATTCACCTGAA
AGGAGCTTTAAAGGAGCCACTTCAGCTCCCCAAAACACCAGCCAAACAGAGGAACAATAGTAAGAGGGAT
GGAGTGGAGGATATTGACAGCCAGGGGGATGGGAGCAGCCAACCAGACACCATCTCCATTGCTTCTAGGA
CCTCTCAGAACACAGTGGACAGTGACAAGGATGGCAACCTTGTTCCTCGGTGGCACCTGGGACCTGGAGA
TCCTTTCTCCACTTACGTTTAG

Translation (1663 aa):
MTDRFWDQWYLWYLRLLRLLDRGSFRNDGLKASDVLPILKEKVAFVSGGRDKRGGPILTFPARSNHDRIR
QEDLRKLVTYLASVPSEDVCKRGFTVIIDMRGSKWDLIKPLLKTLQEAFPAEIHVALIIKPDNFWQKQKT
NFGSSKFIFETSMVSVEGLTKLVDPSQLTEEFDGSLDYNHEEWIELRLSLEEFFNSAVHLLSRLEDLQEM
LARKEFPVDVEGSRRLIDEHTQLKKKVLKAPVEELDREGQRLLQCIRCSDGFSGRNCIPGSADFQSLVPK
ITSLLDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWISHNKELFLQSHTEIGVSYQYALDL
QTQHNHFAMNSMNAYVNINRIMSVASRLSEAGHYASQQIKQISTQLDQEWKSFAAALDERSTILAMSAVF
HQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQTLYEQVTQAYTEVSQDGKALLDVLQRPLSPGN
SESLTATANYSKAVHQVLDVVHEVLHHQRRLESIWQHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFL
SKHTGVGKSLHRARALQKRHDDFEEVAQNTYTNADKLLEAAEQLAQTGECDPEEIYKAARHLEVRIQDFV
RRVEQRKLLLDMSVSFHTHTKELWTWMEDLQKEMLEDVCADSVDAVQELIKQFQQQQTATLDATLNVIKE
GEDLIQQLRSAPPSLGEPSEARDSAVSNNKTPHSSSISHIESVLQQLDDAQVQMEELFHERKIKLDIFLQ
LRIFEQYTIEVTAELDAWNEDLLRQMNDFNTEDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYIT
EVQASGIELICEKDIDLAAQVQELLEFLHEKQHELELNAEQTHKRLEQCLQLRHLQAEVKQVLGWIRNGE
SMLNASLVNASSLSEAEQLQREHEQFQLAIESLFHATSLQKTHQSALQVQQKAEVLLQAGHYDADAIREC
AEKVALHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYRRDEDWCGGRDKLGPAAEIDHVIP
LISKHLEQKEAFLKACTLARRNAEVFLKYIHRNNVSMPSVASHTRGPEQQVKAILSELLQRENRVLHFWT
LKKRRLDQCQQYVVFERSAKQALDWIQETGEFYLSTHTSTGETTEETQELLKEYGEFRVPAKQTKEKVKL
LIQLADSFVEKGHIHATEIRKWVTTVDKHYRDFSLRMGKYRYSLEKALGVNTEDNKDLELDIIPASLSDR
EVKLRDANHEVNEEKRKSARKKEFIMAELLQTEKAYVRDLHECLETYLWEMTSGVEEIPPGILNKEHIIF
GNIQEIYDFHNNIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSNQLILEHAGTFFDEIQQR
HGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGELKDGLEVMLSVPKKANDAMHVSMLEGFDENLD
VQGELILQDAFQVWDPKSLIRKGRERHLFLFEISLVFSKEIKDSSGHTKYVYKNKLLTSELGVTEHVEGD
PCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQERIIHLKGALKEPLQLPKTPAKQRNNSKRD
GVEDIDSQGDGSSQPDTISIASRTSQNTVDSDKDGNLVPRWHLGPGDPFSTYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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