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Report for CCDS42721.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42721.1 Public Homo sapiens 2 EIF5B 24 110 108 CCDS HistoryNCBI Gene:9669Re-query CCDS DB by CCDS ID:42721.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42721.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000289371.11 ENSP00000289371.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000289371.11Link to Ensembl Protein Viewer:ENSP00000289371.5Re-query CCDS DB by Nucleotide ID:ENST00000289371Re-query CCDS DB by Protein ID:ENSP00000289371
Original member Current member NCBI NM_015904.4 NP_056988.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015904.4Link to Protein Sequence:NP_056988.3Re-query CCDS DB by Nucleotide ID:NM_015904Re-query CCDS DB by Protein ID:NP_056988Link to BLAST:NP_056988.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056988.3 1220 O60841 1220 100% 0 0

Chromosomal Locations for CCDS 42721.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 99337555 99337589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99360236 99360361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99360465 99360549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99361148 99361820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99363645 99363862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99364271 99364421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99368493 99368591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99369392 99369481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99371656 99371730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99376347 99376636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99379019 99379126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99379318 99379428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99382159 99382226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99382780 99382921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99389718 99389849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99390219 99390401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99390544 99390705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99392967 99393098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99394267 99394398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99394509 99394585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99394719 99394883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99396760 99396898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99398748 99398909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 99399307 99399414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3663 nt):
ATGGGGAAGAAACAGAAAAACAAGAGCGAAGACAGCACCAAGGATGACATTGATCTTGATGCCTTGGCTG
CAGAAATAGAAGGAGCTGGTGCTGCCAAAGAACAGGAGCCTCAAAAGTCAAAAGGGAAAAAGAAAAAAGA
GAAAAAAAAGCAGGACTTTGATGAAGATGATATCCTGAAAGAACTGGAAGAATTGTCTTTGGAAGCTCAA
GGCATCAAAGCTGACAGAGAAACTGTTGCAGTGAAGCCAACAGAAAACAATGAAGAGGAATTCACCTCAA
AAGATAAAAAAAAGAAAGGACAGAAGGGCAAAAAACAGAGTTTTGATGATAATGATAGCGAAGAATTGGA
AGATAAAGATTCAAAATCAAAAAAGACTGCAAAACCGAAAGTGGAAATGTACTCTGGGAGTGATGATGAT
GATGATTTTAACAAACTTCCTAAAAAAGCTAAAGGGAAAGCTCAAAAATCAAATAAGAAGTGGGATGGGT
CAGAGGAGGATGAGGATAACAGTAAAAAAATTAAAGAGCGTTCAAGAATAAATTCTTCTGGTGAAAGTGG
TGATGAATCAGATGAATTTTTGCAATCTAGAAAAGGACAGAAAAAAAATCAGAAAAACAAGCCAGGTCCT
AACATAGAAAGTGGGAATGAAGATGATGACGCCTCCTTCAAAATTAAGACAGTGGCCCAAAAGAAGGCAG
AAAAGAAGGAGCGCGAGAGAAAAAAGCGAGATGAAGAAAAAGCGAAACTGCGGAAGCTGAAAGAAAAAGA
AGAGTTAGAAACAGGTAAAAAGGATCAGAGTAAACAAAAGGAATCTCAAAGGAAATTTGAAGAAGAAACT
GTAAAATCCAAAGTGACTGTTGATACTGGAGTAATTCCTGCCTCTGAAGAGAAAGCAGAGACTCCCACAG
CTGCAGAAGATGACAATGAAGGAGACAAAAAGAAGAAAGATAAGAAGAAAAAGAAAGGAGAAAAGGAAGA
AAAAGAGAAAGAGAAGAAAAAAGGACCTAGCAAAGCCACTGTTAAAGCTATGCAAGAAGCTCTGGCTAAG
CTTAAAGAGGAAGAAGAAAGACAGAAGAGAGAAGAGGAAGAACGTATAAAACGGCTTGAAGAATTAGAAG
CCAAGCGTAAAGAAGAGGAACGATTGGAACAAGAAAAAAGAGAAAGGAAAAAGCAAAAAGAAAAAGAAAG
AAAAGAACGCTTGAAAAAAGAAGGGAAACTTTTAACTAAATCCCAGAGAGAAGCCAGAGCCAGAGCCGAA
GCTACTCTTAAACTGCTACAAGCTCAGGGTGTTGAAGTGCCATCAAAAGACTCTTTGCCAAAGAAGAGGC
CAATTTATGAAGATAAAAAGAGGAAAAAAATACCACAGCAGCTAGAAAGTAAAGAAGTGTCTGAATCAAT
GGAATTATGTGCTGCTGTAGAAGTTATGGAACAAGGAGTACCAGAAAAGGAAGAGACACCACCTCCTGTT
GAACCAGAAGAAGAAGAAGATACTGAGGATGCTGGATTGGATGATTGGGAAGCTATGGCCAGTGATGAGG
AGACAGAAAAAGTAGAAGGAAACAAAGTTCATATAGAAGTAAAAGAAAACCCTGAAGAGGAGGAGGAGGA
GGAAGAAGAGGAAGAAGAAGATGAAGAAAGTGAAGAAGAGGAGGAAGAGGAGGGAGAAAGTGAAGGCAGT
GAAGGTGATGAGGAAGATGAAAAGGTGTCAGATGAGAAGGATTCAGGGAAGACATTAGATAAAAAGCCAA
GTAAAGAAATGAGCTCAGATTCTGAATATGACTCTGATGATGATCGGACTAAAGAAGAAAGGGCTTATGA
CAAAGCAAAACGGAGGATTGAGAAACGGCGACTTGAACATAGTAAAAATGTAAACACCGAAAAGCTAAGA
GCCCCTATTATCTGCGTACTTGGGCATGTGGACACAGGGAAGACAAAAATTCTAGATAAGCTCCGTCACA
CACATGTACAAGATGGTGAAGCAGGTGGTATCACACAACAAATTGGGGCCACCAATGTTCCTCTTGAAGC
TATTAATGAACAGACTAAGATGATTAAAAATTTTGATAGAGAGAATGTACGGATTCCAGGAATGCTAATT
ATTGATACTCCTGGGCATGAATCTTTCAGTAATCTGAGAAATAGAGGAAGCTCTCTTTGTGACATTGCCA
TTTTAGTTGTTGATATTATGCATGGTTTGGAGCCCCAGACAATTGAGTCTATCAACCTTCTCAAATCTAA
AAAATGTCCCTTCATTGTTGCACTCAATAAGATTGATAGGTTATATGATTGGAAAAAGAGTCCTGACTCT
GATGTGGCTGCTACTTTAAAGAAGCAGAAAAAGAATACAAAAGATGAATTTGAGGAGCGAGCAAAGGCTA
TTATTGTAGAATTTGCACAGCAGGGTTTGAATGCTGCTTTGTTTTATGAGAATAAAGATCCCCGCACTTT
TGTGTCTTTGGTACCTACCTCTGCACATACTGGTGATGGCATGGGAAGTCTGATCTACCTTCTTGTAGAG
TTAACTCAGACCATGTTGAGCAAGAGACTTGCACACTGTGAAGAGCTGAGAGCACAGGTGATGGAGGTTA
AAGCTCTCCCGGGGATGGGCACCACTATAGATGTCATCTTGATCAATGGGCGTTTGAAGGAAGGAGATAC
AATCATTGTTCCTGGAGTAGAAGGGCCCATTGTAACTCAGATTCGAGGCCTCCTGTTACCTCCTCCTATG
AAGGAATTACGAGTGAAGAACCAGTATGAAAAGCATAAAGAAGTAGAAGCAGCTCAGGGGGTAAAGATTC
TTGGAAAAGACCTGGAGAAAACATTGGCTGGTTTACCCCTCCTTGTGGCTTATAAAGAAGATGAAATCCC
TGTTCTTAAAGATGAATTGATCCATGAGTTAAAGCAGACACTAAATGCTATCAAATTAGAAGAAAAAGGA
GTCTATGTCCAGGCATCTACACTGGGTTCTTTGGAAGCTCTACTGGAATTTCTGAAAACATCAGAAGTGC
CCTATGCAGGAATTAACATTGGCCCAGTGCATAAAAAAGATGTTATGAAGGCTTCAGTGATGTTGGAACA
TGACCCTCAGTATGCAGTAATTTTGGCCTTCGATGTGAGAATTGAACGAGATGCACAAGAAATGGCTGAT
AGTTTAGGAGTTAGAATTTTTAGTGCAGAAATTATTTATCATTTATTTGATGCCTTTACAAAATATAGAC
AAGACTACAAGAAACAGAAACAAGAAGAATTTAAGCACATAGCAGTATTTCCCTGCAAGATAAAAATCCT
CCCTCAGTACATTTTTAATTCTCGAGATCCGATAGTGATGGGGGTGACGGTGGAAGCAGGTCAGGTGAAA
CAGGGGACACCCATGTGTGTCCCAAGCAAAAATTTTGTTGACATCGGAATAGTAACAAGTATTGAAATAA
ACCATAAACAAGTGGATGTTGCAAAAAAAGGACAAGAAGTTTGTGTAAAAATAGAACCTATCCCTGGTGA
GTCACCCAAAATGTTTGGAAGACATTTTGAAGCTACAGATATTCTTGTTAGTAAGATCAGCCGGCAGTCC
ATTGATGCACTCAAAGACTGGTTCAGAGATGAAATGCAGAAGAGTGACTGGCAGCTTATTGTGGAGCTGA
AGAAAGTATTTGAAATCATCTAA

Translation (1220 aa):
MGKKQKNKSEDSTKDDIDLDALAAEIEGAGAAKEQEPQKSKGKKKKEKKKQDFDEDDILKELEELSLEAQ
GIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSGSDDD
DDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGP
NIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEET
VKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAK
LKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAE
ATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPV
EPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGS
EGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDKAKRRIEKRRLEHSKNVNTEKLR
APIICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLI
IDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLYDWKKSPDS
DVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAALFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLVE
LTQTMLSKRLAHCEELRAQVMEVKALPGMGTTIDVILINGRLKEGDTIIVPGVEGPIVTQIRGLLLPPPM
KELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKG
VYVQASTLGSLEALLEFLKTSEVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMAD
SLGVRIFSAEIIYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKIKILPQYIFNSRDPIVMGVTVEAGQVK
QGTPMCVPSKNFVDIGIVTSIEINHKQVDVAKKGQEVCVKIEPIPGESPKMFGRHFEATDILVSKISRQS
IDALKDWFRDEMQKSDWQLIVELKKVFEII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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