NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9924.1 Public Homo sapiens 14 SERPINA6 24 110 108 CCDS HistoryNCBI Gene:866Re-query CCDS DB by CCDS ID:9924.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9924.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341584.4 ENSP00000342850.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341584.4Link to Ensembl Protein Viewer:ENSP00000342850.3Re-query CCDS DB by Nucleotide ID:ENST00000341584Re-query CCDS DB by Protein ID:ENSP00000342850
Original member Current member NCBI NM_001756.4 NP_001747.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001756.4Link to Protein Sequence:NP_001747.3Re-query CCDS DB by Nucleotide ID:NM_001756Re-query CCDS DB by Protein ID:NP_001747Link to BLAST:NP_001747.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001747.3 405 P08185 405 100% 0 0

Chromosomal Locations for CCDS 9924.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94304418 94304603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94306071 94306218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94309736 94310006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94314036 94314648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1218 nt):
ATGCCACTCCTCCTGTACACCTGTCTTCTCTGGCTGCCCACCAGCGGCCTCTGGACCGTCCAGGCCATGG
ATCCTAACGCTGCTTATGTGAACATGAGTAACCATCACCGGGGCCTGGCTTCAGCCAACGTTGACTTTGC
CTTCAGCCTGTATAAGCACCTAGTGGCCTTGAGTCCCAAAAAGAACATTTTCATCTCCCCTGTGAGCATC
TCCATGGCCTTAGCTATGCTGTCCCTGGGCACCTGTGGCCACACACGGGCCCAGCTTCTCCAGGGCCTGG
GTTTCAACCTCACTGAGAGGTCTGAGACTGAGATCCACCAGGGTTTCCAGCACCTGCACCAACTCTTTGC
AAAGTCAGACACCAGCTTAGAAATGACCATGGGCAATGCCTTGTTTCTTGATGGCAGCCTGGAGTTGCTG
GAGTCATTCTCAGCAGACATCAAGCACTACTATGAGTCAGAGGTCTTGGCTATGAATTTCCAGGACTGGG
CAACAGCCAGCAGACAGATCAACAGCTATGTCAAGAATAAGACACAGGGGAAAATTGTCGACTTGTTTTC
AGGGCTGGATAGCCCAGCCATCCTCGTCCTGGTCAACTATATCTTCTTCAAAGGCACATGGACACAGCCC
TTTGACCTGGCAAGCACCAGGGAGGAGAACTTCTATGTGGACGAGACAACTGTGGTGAAGGTGCCCATGA
TGTTGCAGTCGAGCACCATCAGTTACCTTCATGACTCGGAGCTCCCCTGCCAGCTGGTGCAGATGAACTA
CGTGGGCAATGGGACTGTCTTCTTCATCCTTCCGGACAAGGGGAAGATGAACACAGTCATCGCTGCACTG
AGCCGGGACACGATTAACAGGTGGTCCGCAGGCCTGACCAGCAGCCAGGTGGACCTGTACATTCCAAAGG
TCACCATCTCTGGAGTCTATGACCTCGGAGATGTGCTGGAGGAAATGGGCATTGCAGACTTGTTCACCAA
CCAGGCAAATTTCTCACGCATCACCCAGGACGCCCAGCTGAAGTCATCAAAGGTGGTCCATAAAGCTGTG
CTGCAACTCAATGAGGAGGGTGTGGACACAGCTGGCTCCACTGGGGTCACCCTAAACCTGACGTCCAAGC
CTATCATCTTGCGTTTCAACCAGCCCTTCATCATCATGATCTTCGACCACTTCACCTGGAGCAGCCTTTT
CCTGGCGAGGGTTATGAACCCAGTGTAA

Translation (405 aa):
MPLLLYTCLLWLPTSGLWTVQAMDPNAAYVNMSNHHRGLASANVDFAFSLYKHLVALSPKKNIFISPVSI
SMALAMLSLGTCGHTRAQLLQGLGFNLTERSETEIHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELL
ESFSADIKHYYESEVLAMNFQDWATASRQINSYVKNKTQGKIVDLFSGLDSPAILVLVNYIFFKGTWTQP
FDLASTREENFYVDETTVVKVPMMLQSSTISYLHDSELPCQLVQMNYVGNGTVFFILPDKGKMNTVIAAL
SRDTINRWSAGLTSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTNQANFSRITQDAQLKSSKVVHKAV
LQLNEEGVDTAGSTGVTLNLTSKPIILRFNQPFIIMIFDHFTWSSLFLARVMNPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH