NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS866.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
866.1 Public Homo sapiens 1 DCLRE1B 24 110 108 CCDS HistoryNCBI Gene:64858Re-query CCDS DB by CCDS ID:866.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 866.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650450.2 ENSP00000498042.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000650450.2Link to Ensembl Protein Viewer:ENSP00000498042.1Re-query CCDS DB by Nucleotide ID:ENST00000650450Re-query CCDS DB by Protein ID:ENSP00000498042
Original member Current member NCBI NM_022836.4 NP_073747.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022836.4Link to Protein Sequence:NP_073747.1Re-query CCDS DB by Nucleotide ID:NM_022836Re-query CCDS DB by Protein ID:NP_073747Link to BLAST:NP_073747.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073747.1 532 Q9H816 532 100% 0 0

Chromosomal Locations for CCDS 866.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 113905587 113905775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113906996 113907161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113908009 113908191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113911131 113912191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGAATGGGGTCCTGATCCCCCATACGCCCATCGCAGTGGACTTCTGGAGCCTGCGCCGGGCTGGCACCG
CACGTCTCTTCTTCTTGTCTCACATGCACTCGGACCACACCGTGGGCCTGTCTAGCACCTGGGCCCGGCC
CCTCTACTGCTCCCCAATTACAGCCCACCTCTTGCATCGTCACCTACAGGTATCTAAGCAATGGATCCAA
GCCCTGGAGGTTGGTGAGAGCCATGTATTACCCCTAGATGAAATTGGACAAGAGACCATGACCGTAACCC
TCCTCGATGCCAATCACTGTCCTGGTTCTGTCATGTTTCTCTTTGAAGGATATTTTGGAACCATCCTCTA
CACAGGTGATTTTCGATACACACCATCCATGCTAAAGGAGCCAGCCCTGACACTGGGGAAACAGATCCAT
ACTTTATACCTAGACAACACCAATTGCAATCCAGCCCTGGTTCTTCCTTCCCGACAAGAAGCTGCCCACC
AGATTGTCCAGCTCATTCGAAAACACCCACAACATAACATAAAGATTGGACTCTACAGCCTGGGAAAGGA
ATCACTGCTGGAGCAGCTGGCCCTGGAGTTTCAGACCTGGGTGGTATTGAGTCCTCGGCGCCTGGAGTTG
GTACAGCTACTGGGCCTGGCAGATGTGTTCACAGTGGAGGAGAAGGCTGGCCGCATCCATGCAGTAGACC
ATATGGAGATCTGCCATTCCAACATGCTGCGTTGGAACCAGACCCACCCTACGATTGCTATCCTTCCCAC
AAGCCGAAAAATCCACAGCTCCCACCCTGATATCCACGTCATCCCTTACTCTGACCATTCCTCTTACTCC
GAGCTTCGTGCCTTTGTCGCAGCACTGAAGCCTTGCCAGGTGGTGCCCATTGTAAGTCGGCGGCCCTGTG
GAGGCTTTCAGGACAGTCTGAGCCCCAGGATCTCCGTGCCCCTGATTCCGGACTCTGTACAGCAATACAT
GAGTTCTTCCTCTAGAAAACCAAGCCTTCTCTGGCTGTTAGAAAGGAGGCTAAAGAGGCCGAGAACCCAA
GGTGTTGTGTTTGAATCCCCTGAGGAAAGTGCTGATCAATCTCAAGCTGACAGAGACTCAAAGAAGGCCA
AGAAAGAGAAACTTTCTCCCTGGCCTGCGGACCTTGAAAAGCAGCCTTCCCACCATCCTTTGCGGATCAA
GAAGCAGTTGTTCCCAGATCTCTATAGCAAAGAATGGAACAAGGCAGTGCCTTTCTGTGAGTCTCAAAAG
AGGGTGACTATGTTGACGGCCCCACTGGGATTTTCAGTGCACTTAAGGTCTACAGATGAGGAGTTTATTT
CTCAAAAAACCAGGGAGGAAATTGGTTTAGGGTCCCCCTTGGTACCCATGGGAGATGATGATGGAGGTCC
AGAAGCCACAGGGAATCAGAGTGCCTGGATGGGCCATGGTTCTCCCCTGTCCCACAGCAGCAAGGGCACC
CCTCTTCTAGCTACTGAATTCAGGGGTCTAGCACTCAAATATCTTCTGACTCCAGTGAACTTTTTCCAGG
CAGGGTATTCTTCCAGGAGATTTGACCAGCAAGTGGAAAAATACCATAAACCCTGCTGA

Translation (532 aa):
MNGVLIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQVSKQWIQ
ALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIH
TLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLEL
VQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRWNQTHPTIAILPTSRKIHSSHPDIHVIPYSDHSSYS
ELRAFVAALKPCQVVPIVSRRPCGGFQDSLSPRISVPLIPDSVQQYMSSSSRKPSLLWLLERRLKRPRTQ
GVVFESPEESADQSQADRDSKKAKKEKLSPWPADLEKQPSHHPLRIKKQLFPDLYSKEWNKAVPFCESQK
RVTMLTAPLGFSVHLRSTDEEFISQKTREEIGLGSPLVPMGDDDGGPEATGNQSAWMGHGSPLSHSSKGT
PLLATEFRGLALKYLLTPVNFFQAGYSSRRFDQQVEKYHKPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH