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Report for CCDS12845.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12845.1 Public Homo sapiens 19 ZNF350 24 110 108 CCDS HistoryNCBI Gene:59348Re-query CCDS DB by CCDS ID:12845.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12845.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000243644.9 ENSP00000243644.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000243644.9Link to Ensembl Protein Viewer:ENSP00000243644.3Re-query CCDS DB by Nucleotide ID:ENST00000243644Re-query CCDS DB by Protein ID:ENSP00000243644
Original member Current member NCBI NM_021632.4 NP_067645.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021632.4Link to Protein Sequence:NP_067645.3Re-query CCDS DB by Nucleotide ID:NM_021632Re-query CCDS DB by Protein ID:NP_067645Link to BLAST:NP_067645.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067645.3 532 Q9GZX5 532 100% 0 0

Chromosomal Locations for CCDS 12845.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51964854 51966214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51968578 51968673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51969005 51969131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51974346 51974360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGATCCAGGCCCAGGAATCCATAACACTGGAGGATGTGGCTGTGGACTTCACTTGGGAGGAGTGGCAAC
TCCTGGGCGCTGCTCAGAAGGACCTGTACCGGGATGTGATGTTGGAGAACTACAGCAACCTGGTGGCAGT
GGGGTATCAAGCCAGCAAACCGGATGCACTCTTCAAGTTGGAACAAGGAGAACAACTGTGGACAATTGAA
GATGGAATCCACAGTGGAGCCTGTTCAGACATATGGAAAGTTGATCATGTGCTGGAGCGCTTGCAGAGTG
AAAGCCTGGTGAACAGAAGGAAACCATGTCATGAACATGATGCATTTGAAAATATTGTTCATTGCAGCAA
AAGTCAGTTTCTGTTAGGGCAAAATCATGATATATTTGACTTACGTGGAAAAAGTTTGAAATCCAATTTA
ACTTTAGTTAACCAGAGCAAAGGCTATGAAATAAAGAACTCTGTTGAGTTTACTGGAAATGGGGACTCCT
TTCTTCATGCTAACCATGAACGACTTCATACTGCAATTAAATTCCCTGCAAGTCAAAAACTCATCAGCAC
TAAGTCCCAATTCATCAGTCCCAAGCATCAGAAAACACGAAAATTAGAGAAGCATCATGTGTGCAGTGAA
TGTGGGAAAGCCTTCATCAAGAAGTCTTGGCTAACTGATCACCAGGTAATGCATACAGGAGAGAAACCCC
ACAGATGTAGTCTATGTGAGAAAGCCTTCTCCAGAAAGTTCATGCTTACTGAACATCAGCGAACTCATAC
AGGAGAAAAACCTTATGAATGCCCTGAATGTGGCAAAGCCTTTCTCAAGAAATCACGGCTCAACATACAT
CAGAAAACACATACCGGAGAGAAACCCTATATATGCAGTGAATGTGGAAAAGGCTTCATCCAGAAAGGAA
ATCTCATTGTACACCAGCGAATTCATACAGGTGAGAAACCTTATATATGCAATGAATGTGGAAAAGGCTT
CATTCAGAAGACGTGTCTCATAGCACATCAGAGATTTCACACAGGAAAGACGCCCTTTGTGTGCAGTGAA
TGTGGAAAATCCTGTTCTCAGAAATCAGGTCTCATTAAACATCAAAGAATTCACACAGGAGAGAAACCCT
TTGAATGTAGTGAATGTGGGAAAGCCTTTAGCACAAAGCAAAAGCTCATTGTCCATCAAAGGACTCATAC
AGGAGAGAGACCCTATGGCTGTAACGAGTGTGGGAAAGCGTTTGCGTATATGTCGTGTCTGGTTAAGCAT
AAGAGAATACACACAAGGGAGAAACAAGAGGCAGCCAAGGTGGAAAATCCTCCTGCAGAGAGGCACAGCT
CATTACACACCAGTGATGTCATGCAGGAGAAAAACTCTGCTAACGGGGCGACTACACAAGTGCCTTCTGT
GGCCCCTCAGACATCATTAAACATCAGCGGCCTCCTCGCAAACAGGAACGTAGTCCTTGTGGGACAGCCA
GTGGTCAGATGTGCAGCCTCAGGAGATAACAGAGGATTTGCACAGGACAGAAACCTTGTGAATGCAGTGA
ATGTGGTTGTGCCTTCCGTGATCAATTATGTCTTATTTTATGTTACAGAAAACCCATAG

Translation (532 aa):
MIQAQESITLEDVAVDFTWEEWQLLGAAQKDLYRDVMLENYSNLVAVGYQASKPDALFKLEQGEQLWTIE
DGIHSGACSDIWKVDHVLERLQSESLVNRRKPCHEHDAFENIVHCSKSQFLLGQNHDIFDLRGKSLKSNL
TLVNQSKGYEIKNSVEFTGNGDSFLHANHERLHTAIKFPASQKLISTKSQFISPKHQKTRKLEKHHVCSE
CGKAFIKKSWLTDHQVMHTGEKPHRCSLCEKAFSRKFMLTEHQRTHTGEKPYECPECGKAFLKKSRLNIH
QKTHTGEKPYICSECGKGFIQKGNLIVHQRIHTGEKPYICNECGKGFIQKTCLIAHQRFHTGKTPFVCSE
CGKSCSQKSGLIKHQRIHTGEKPFECSECGKAFSTKQKLIVHQRTHTGERPYGCNECGKAFAYMSCLVKH
KRIHTREKQEAAKVENPPAERHSSLHTSDVMQEKNSANGATTQVPSVAPQTSLNISGLLANRNVVLVGQP
VVRCAASGDNRGFAQDRNLVNAVNVVVPSVINYVLFYVTENP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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