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Report for CCDS5337.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5337.1 Public Homo sapiens 7 RBAK 24 110 108 CCDS HistoryNCBI Gene:57786Re-query CCDS DB by CCDS ID:5337.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5337.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000353796.7 ENSP00000275423.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000353796.7Link to Ensembl Protein Viewer:ENSP00000275423.4Re-query CCDS DB by Nucleotide ID:ENST00000353796Re-query CCDS DB by Protein ID:ENSP00000275423
Original member Current member EBI ENST00000396912.2 ENSP00000380120.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396912.2Link to Ensembl Protein Viewer:ENSP00000380120.1Re-query CCDS DB by Nucleotide ID:ENST00000396912Re-query CCDS DB by Protein ID:ENSP00000380120
Original member Current member NCBI NM_001204456.2 NP_001191385.1 Accepted alive Link to Nucleotide Sequence:NM_001204456.2Link to Protein Sequence:NP_001191385.1Re-query CCDS DB by Nucleotide ID:NM_001204456Re-query CCDS DB by Protein ID:NP_001191385Link to BLAST:NP_001191385.1
Original member Current member NCBI NM_021163.4 NP_066986.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021163.4Link to Protein Sequence:NP_066986.1Re-query CCDS DB by Nucleotide ID:NM_021163Re-query CCDS DB by Protein ID:NP_066986Link to BLAST:NP_066986.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191385.1 714 Q9NYW8-1 714 100% 0 0
NP_066986.1 714 Q9NYW8-1 714 100% 0 0

Chromosomal Locations for CCDS 5337.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 5048077 5048091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5057295 5057421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5057684 5057779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 5063695 5065601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2145 nt):
ATGAACACATTGCAGGGGCCAGTGTCATTCAAAGATGTGGCTGTGGATTTCACCCAGGAGGAGTGGCAGC
AGCTGGACCCTGATGAGAAGATAACTTACAGGGATGTGATGTTGGAGAACTATAGCCATCTAGTTTCTGT
GGGATATGATACCACCAAGCCAAACGTCATCATTAAGTTGGAGCAGGGAGAGGAGCCGTGGATAATGGGA
GGTGAATTTCCATGTCAACATAGTCCAGAAGCCTGGAGAGTTGATGACCTGATAGAGAGAATCCAAGAAA
ACGAAGACAAACATTCAAGGCAAGCTGCTTGTATCAATAGCAAAACCCTGACTGAAGAGAAAGAGAATAC
ATTTAGTCAAATTTACATGGAAACAAGCCTTGTTCCTTCAAGCATAATAGCTCATAATTGTGTCTCATGT
GGAAAGAATTTAGAATCTATTTCGCAATTAATTAGTAGTGATGGAAGCTATGCTAGGACAAAACCTGATG
AGTGTAATGAATGTGGGAAAACATATCATGGAGAGAAAATGTGTGAATTTAATCAAAATGGGGATACCTA
TTCTCACAATGAAGAAAATATTCTTCAGAAAATTAGTATTTTGGAGAAACCCTTTGAATATAATGAATGC
ATGGAAGCCTTAGACAATGAGGCTGTTTTTATTGCTCATAAGAGAGCTTACATAGGGGAGAAGCCCTATG
AGTGGAATGATTCTGGACCAGACTTCATACAGATGTCAAATTTTAATGCATATCAGAGATCACAAATGGA
AATGAAGCCCTTTGAATGCAGTGAATGTGGAAAATCCTTCTGTAAAAAGTCAAAATTCATCATCCACCAG
AGGGCTCACACAGGAGAGAAACCTTATGAATGTAATGTATGTGGGAAATCCTTCAGCCAAAAGGGAACCC
TCACTGTACATCGGAGATCACACTTAGAGGAGAAGCCCTATAAATGTAATGAATGTGGGAAAACCTTTTG
TCAGAAGTTACACCTCACTCAACACCTAAGAACTCATTCAGGAGAGAAACCCTACGAATGTAGCGAATGT
GGGAAAACCTTCTGCCAAAAGACACATCTCACCCTGCACCAGAGGAATCATTCAGGAGAGAGGCCCTATC
CATGTAACGAATGTGGGAAATCCTTCTCCCGCAAGTCTGCTCTCAGTGACCATCAGAGAACTCACACGGG
AGAGAAGCTTTATAAATGTAATGAATGTGGGAAATCCTACTACCGAAAGTCTACTCTGATTACACATCAG
AGAACACACACGGGAGAGAAGCCCTATCAGTGTAGCGAGTGTGGGAAATTCTTTTCTCGGGTGTCATACC
TCACTATACATTATAGAAGTCATTTAGAAGAGAAACCCTATGAATGTAATGAATGTGGCAAAACCTTCAA
TTTAAATTCAGCCTTCATTAGACATCGGAAAGTACACACAGAAGAGAAATCCCATGAATGTAGTGAATGT
GGAAAGTTCTCTCAGTTGTATCTCACCGACCATCATACAGCTCATTTAGAAGAGAAACCCTATGAATGTA
ATGAATGTGGGAAAACCTTCCTTGTAAATTCAGCCTTCGATGGGCACCAGCCACTTCCAAAAGGGGAGAA
ATCCTATGAATGTAATGTATGTGGAAAGTTATTCAATGAGTTGTCATACTATACTGAACATTATAGAAGT
CATTCAGAAGAGAAACCTTATGGATGTAGCGAATGTGGGAAAACCTTTTCCCATAATTCATCCCTCTTCA
GACATCAAAGAGTACACACAGGCGAGAAACCCTATGAATGTTACGAATGTGGAAAATTCTTCTCTCAGAA
ATCATATCTCACTATACATCATCGAATTCATTCAGGAGAGAAACCCTATGAATGTAGTAAATGTGGAAAA
GTCTTCTCTCGGATGTCAAACCTCACTGTCCACTACAGAAGCCATTCAGGAGAGAAACCCTATGAATGTA
ATGAATGTGGGAAAGTCTTTTCTCAGAAGTCATACCTCACTGTACACTATAGAACTCATTCAGGAGAGAA
ACCCTATGAATGTAACGAGTGTGGGAAAAAATTCCACCACAGATCAGCCTTCAATAGCCATCAGAGAATT
CATAGAAGAGGAAATATGAACGTACTTGATGTGGAAAATCTCTGA

Translation (714 aa):
MNTLQGPVSFKDVAVDFTQEEWQQLDPDEKITYRDVMLENYSHLVSVGYDTTKPNVIIKLEQGEEPWIMG
GEFPCQHSPEAWRVDDLIERIQENEDKHSRQAACINSKTLTEEKENTFSQIYMETSLVPSSIIAHNCVSC
GKNLESISQLISSDGSYARTKPDECNECGKTYHGEKMCEFNQNGDTYSHNEENILQKISILEKPFEYNEC
MEALDNEAVFIAHKRAYIGEKPYEWNDSGPDFIQMSNFNAYQRSQMEMKPFECSECGKSFCKKSKFIIHQ
RAHTGEKPYECNVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGEKPYECSEC
GKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGEKLYKCNECGKSYYRKSTLITHQ
RTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECNECGKTFNLNSAFIRHRKVHTEEKSHECSEC
GKFSQLYLTDHHTAHLEEKPYECNECGKTFLVNSAFDGHQPLPKGEKSYECNVCGKLFNELSYYTEHYRS
HSEEKPYGCSECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGK
VFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRI
HRRGNMNVLDVENL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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