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Report for CCDS10264.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10264.1 Public Homo sapiens 15 ARID3B 24 110 108 CCDS HistoryNCBI Gene:10620Re-query CCDS DB by CCDS ID:10264.1Re-query CCDS DB by GeneID:10620See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10264.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000346246.10 ENSP00000343126.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000346246.10Link to Ensembl Protein Viewer:ENSP00000343126.5Re-query CCDS DB by Nucleotide ID:ENST00000346246Re-query CCDS DB by Protein ID:ENSP00000343126
Original member Current member NCBI NM_006465.4 NP_006456.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006465.4Link to Protein Sequence:NP_006456.1Re-query CCDS DB by Nucleotide ID:NM_006465Re-query CCDS DB by Protein ID:NP_006456Link to BLAST:NP_006456.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006456.1 560 Q8IVW6-4 560 100% 0 0

Chromosomal Locations for CCDS 10264.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74543937 74544488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74572862 74572933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74573132 74573204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74589820 74590003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74591151 74591434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74591560 74591814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74593138 74593236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74595611 74595774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1683 nt):
ATGGAGCCACTTCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGAAGCAGCCACACCTGGCTCCTCTGC
AGATGGATGCCAGAGAGAAGCAGGGCCAGCAGATGAGAGAAGCCCAGTTCTTGTATGCCCAAAAGCTGGT
CACACAGCCGACTCTCCTTTCCGCCACAGCTGGGAGACCTTCTGGCAGCACTCCCTTAGGTCCCTTAGCC
AGAGTTCCACCCACCGCAGCAGTGGCCCAAGTGTTTGAACGGGGCAACATGAACTCAGAGCCTGAGGAAG
AGGACGGAGGTTTGGAAGATGAGGATGGGGATGATGAAGTTGCAGAGGTGGCTGAGAAAGAAACCCAGGC
TGCTTCAAAATATTTTCATGTGCAGAAAGTAGCTCGCCAAGATCCCAGAGTGGCACCCATGTCCAATCTA
CTTCCAGCACCAGGGCTCCCACCACATGGACAACAAGCTAAAGAAGACCATACCAAAGATGCTTCCAAGG
CCTCACCTTCTGTCTCCACAGCAGGACAGCCGAACTGGAATCTGGATGAGCAGCTCAAGCAGAATGGTGG
TTTGGCCTGGAGTGATGATGCAGATGGAGGCCGGGGAAGAGAGATCTCTCGAGATTTTGCCAAGCTGTAT
GAACTGGACGGTGATCCTGAAAGGAAAGAGTTCCTGGATGACCTCTTCGTCTTTATGCAGAAGAGGGGGA
CCCCCATCAACCGAATCCCCATCATGGCCAAACAGATCCTGGACCTGTACATGCTGTATAAGCTGGTGAC
CGAGAAGGGAGGCCTGGTGGAGATCATCAACAAGAAGATCTGGAGGGAGATCACCAAAGGCCTAAACCTG
CCCACATCCATCACCAGCGCCGCCTTCACCCTCAGGACGCAGTACATGAAGTATCTGTATGCCTATGAGT
GTGAGAAGAAAGCCTTGAGTTCCCCAGCCGAGCTCCAGGCAGCAATTGATGGCAACCGCAGGGAGGGCCG
GCGGCCCAGCTACAGCTCCTCCCTCTTTGGCTACTCACCTGCTGCGGCTACTGCTGCTGCCGCTGCCGGG
GCCCCTGCCCTTCTCTCCCCACCCAAGATCCGCTTTCCCATCCTTGGGCTTGGCTCCAGCAGTGGTACCA
ATACCAGTAGCCCTCGGATATCCCCAGCAACCACTCTCAGGAAAGGTGATGGAGCCCCAGTGACAACAGT
GCCTGTGCCAAATCGTCTGGCTGTGCCCGTGACCTTGGCAAGCCAGCAGGCTGGTACTCGGACCGCCGCA
CTGGAGCAGCTGCGGGAGCGGCTGGAGTCAGGGGAGCCTGCTGAGAAGAAGGCATCGAGGCTGTCTGAGG
AGGAGCAGCGCCTGGTGCAGCAGGCCTTCCAGCGCAACTTTTTCAGCATGGCACGGCAGCTCCCCATGAA
GATCAGGATCAACGGCAGGGAAGACAGAGCAGAGGCCTCGGCTGCAGCACTGAACCTGACCACGAGTAGC
ATTGGGAGCATTAACATGTCTGTGGACATCGATGGCACCACCTATGCAGGTGTGCTGTTTGCCCAGAAGC
CTGTGGTCCACCTCATCACGGGGTCTGCTCCCCAGAGCCTCGGCAGCAGCGCCAGCAGCAGCAGCAGCTC
TCACTGTTCACCAAGTCCTACCTCATCCCGGGGCACCCCCAGCGCAGAGCCCTCCACCAGCTGGTCCCTC
TGA

Translation (560 aa):
MEPLQQQQQQQQQQQKQPHLAPLQMDAREKQGQQMREAQFLYAQKLVTQPTLLSATAGRPSGSTPLGPLA
RVPPTAAVAQVFERGNMNSEPEEEDGGLEDEDGDDEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNL
LPAPGLPPHGQQAKEDHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREISRDFAKLY
ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNL
PTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAAAG
APALLSPPKIRFPILGLGSSSGTNTSSPRISPATTLRKGDGAPVTTVPVPNRLAVPVTLASQQAGTRTAA
LEQLRERLESGEPAEKKASRLSEEEQRLVQQAFQRNFFSMARQLPMKIRINGREDRAEASAAALNLTTSS
IGSINMSVDIDGTTYAGVLFAQKPVVHLITGSAPQSLGSSASSSSSSHCSPSPTSSRGTPSAEPSTSWSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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