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Report for CCDS64195.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64195.1 Public Homo sapiens 5 EDIL3 24 110 108 CCDS HistoryNCBI Gene:10085Re-query CCDS DB by CCDS ID:64195.1Re-query CCDS DB by GeneID:10085See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64195.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380138.3 ENSP00000369483.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380138.3Link to Ensembl Protein Viewer:ENSP00000369483.3Re-query CCDS DB by Nucleotide ID:ENST00000380138Re-query CCDS DB by Protein ID:ENSP00000369483
Original member Current member NCBI NM_001278642.1 NP_001265571.1 Accepted alive Link to Nucleotide Sequence:NM_001278642.1Link to Protein Sequence:NP_001265571.1Re-query CCDS DB by Nucleotide ID:NM_001278642Re-query CCDS DB by Protein ID:NP_001265571Link to BLAST:NP_001265571.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265571.1 470 O43854-2 470 100% 0 0

Chromosomal Locations for CCDS 64195.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 83943419 83943568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 83963205 83963360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84060300 84060484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84064700 84064844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84066451 84066606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84106649 84106830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84137241 84137354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84180393 84180521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84254084 84254212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 84384308 84384374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGAAGCGCTCGGTAGCCGTCTGGCTCTTGGTCGGGCTCAGCCTCGGTGTCCCCCAGTTCGGCAAAGGTG
ATATTTGTGATCCCAATCCATGTGAAAATGGAGGTATCTGTTTGCCAGGATTGGCTGATGGTTCCTTTTC
CTGTGAGTGTCCAGATGGCTTCACAGACCCCAACTGTTCTAGTGTTGTGGAGGTTGGTCCCTGCACTCCT
AATCCATGCCATAATGGAGGAACCTGTGAAATAAGTGAAGCATACCGAGGGGATACATTCATAGGCTATG
TTTGTAAATGTCCCCGAGGATTTAATGGGATTCACTGTCAGCACAACATAAATGAATGCGAAGTTGAGCC
TTGCAAAAATGGTGGAATATGTACAGATCTTGTTGCTAACTATTCCTGTGAGTGCCCAGGCGAATTTATG
GGAAGAAATTGTCAATACAAATGCTCAGGCCCACTGGGAATTGAAGGTGGAATTATATCAAACCAGCAAA
TCACAGCTTCCTCTACTCACCGAGCTCTTTTTGGACTCCAAAAATGGTATCCCTACTATGCACGTCTTAA
TAAGAAGGGGCTTATAAATGCGTGGACAGCTGCAGAAAATGACAGATGGCCGTGGATTCAGATAAATTTG
CAAAGGAAAATGAGAGTTACTGGTGTGATTACCCAAGGAGCCAAGAGGATTGGAAGCCCAGAGTATATAA
AATCCTACAAAATTGCCTACAGTAATGATGGAAAGACTTGGGCAATGTACAAAGTGAAAGGCACCAATGA
AGACATGGTGTTTCGTGGAAACATTGATAACAACACTCCATATGCTAACTCTTTCACACCCCCCATAAAA
GCTCAGTATGTAAGACTCTATCCCCAAGTTTGTCGAAGACATTGCACTTTGCGAATGGAACTTCTTGGCT
GTGAACTGTCGGGTTGTTCTGAGCCTCTGGGTATGAAATCAGGACATATACAAGACTATCAGATCACTGC
CTCCAGCATCTTCAGAACGCTCAACATGGACATGTTCACTTGGGAACCAAGGAAAGCTCGGCTGGACAAG
CAAGGCAAAGTGAATGCCTGGACCTCTGGCCACAATGACCAGTCACAATGGTTACAGGTGGATCTTCTTG
TTCCAACCAAAGTGACTGGCATCATTACACAAGGAGCTAAAGATTTTGGTCATGTACAGTTTGTTGGCTC
CTACAAACTGGCTTACAGCAATGATGGAGAACACTGGACTGTATACCAGGATGAAAAGCAAAGAAAAGAT
AAGGTTTTCCAGGGAAATTTTGACAATGACACTCACAGAAAAAATGTCATCGACCCTCCCATCTATGCAC
GACACATAAGAATCCTTCCTTGGTCCTGGTACGGGAGGATCACATTGCGGTCAGAGCTGCTGGGCTGCAC
AGAGGAGGAATGA

Translation (470 aa):
MKRSVAVWLLVGLSLGVPQFGKGDICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVGPCTP
NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM
GRNCQYKCSGPLGIEGGIISNQQITASSTHRALFGLQKWYPYYARLNKKGLINAWTAAENDRWPWIQINL
QRKMRVTGVITQGAKRIGSPEYIKSYKIAYSNDGKTWAMYKVKGTNEDMVFRGNIDNNTPYANSFTPPIK
AQYVRLYPQVCRRHCTLRMELLGCELSGCSEPLGMKSGHIQDYQITASSIFRTLNMDMFTWEPRKARLDK
QGKVNAWTSGHNDQSQWLQVDLLVPTKVTGIITQGAKDFGHVQFVGSYKLAYSNDGEHWTVYQDEKQRKD
KVFQGNFDNDTHRKNVIDPPIYARHIRILPWSWYGRITLRSELLGCTEEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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