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Report for CCDS58092.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58092.1 Public Homo sapiens 10 ARHGAP19 24 110 108 CCDS HistoryNCBI Gene:84986Re-query CCDS DB by CCDS ID:58092.1Re-query CCDS DB by GeneID:84986See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58092.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371027.5 ENSP00000360066.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371027.5Link to Ensembl Protein Viewer:ENSP00000360066.1Re-query CCDS DB by Nucleotide ID:ENST00000371027Re-query CCDS DB by Protein ID:ENSP00000360066
Original member Current member NCBI NM_001256423.2 NP_001243352.1 Accepted alive Link to Nucleotide Sequence:NM_001256423.2Link to Protein Sequence:NP_001243352.1Re-query CCDS DB by Nucleotide ID:NM_001256423Re-query CCDS DB by Protein ID:NP_001243352Link to BLAST:NP_001243352.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243352.1 485 Q14CB8-3 485 100% 0 0

Chromosomal Locations for CCDS 58092.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97226122 97226132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97229147 97229225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97229764 97229874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97235217 97235315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97243968 97244159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97246272 97246337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97256318 97256404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97259402 97259628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97263420 97263629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97264826 97264906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97265860 97266125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97270606 97270634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGCCTCATCAGAAACTTTCAGCACTTATTGATGCCATCTGCAGTTTTGTGATCTGCAATGATTCTTCCC
TTCGAGGTCAGCCCATTATCTTTAATCCTGACTTTTTTGTGGAGAAACTCCGACATGAGAAACCTGAGAT
TTTCACTGAGTTGGTGGTCAGCAATATCACAAGGCTCATCGATTTACCTGGAACTGAGTTGGCTCAGCTG
ATGGGGGAAGTGGACCTTAAGTTGCCTGGCGGGGCTGGCCCAGCATCAGGATTCTTCCGGTCTCTCATGT
CTCTCAAGCGAAAGGAAAAAGGAGTGATATTTGGGTCCCCACTGACGGAGGAAGGCATTGCCCAGATATA
CCAACTGATTGAGTATCTACACAAAAACTTGCGAGTAGAGGGTTTGTTTAGAGTACCGGGTAATAGTGTC
CGACAGCAGATTTTAAGGGATGCTCTCAATAATGGAACTGACATTGACTTGGAATCAGGGGAATTTCACT
CAAATGATGTTGCCACTTTGCTGAAGATGTTTCTAGGAGAGTTGCCGGAGCCTCTGCTGACACATAAACA
CTTCAATGCACACCTCAAAATCGCTGATTTGATGCAGTTTGATGATAAAGGAAACAAGACCAATATACCA
GACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCATTCTCCCTCCTCCTAATCGTAATTTGC
TGAAGTTATTGCTTGATCTCCTATACCAGACAGCAAAGAAACAAGACAAGAACAAGATGTCAGCCTATAA
CCTTGCCCTTATGTTTGCACCCCATGTCCTGTGGCCAAAAAATGTCACTGCAAATGACCTTCAGGAGAAT
ATCACAAAGTTAAACAGTGGGATGGCTTTTATGATTAAACACTCCCAGAAACTTTTTAAGGCTCCTGCTT
ACATTCGGGAGTGTGCGAGATTGCACTATTTGGGATCCAGAACTCAGGCATCAAAGGATGACCTTGACCT
CATAGCTTCATGTCATACTAAGTCCTTTCAGCTGGCAAAGTCTCAGAAACGGAACCGGGTAGATTCCTGC
CCTCACCAGGAGGAGACCCAGCACCATACGGAAGAGGCACTGAGAGAGCTGTTTCAACACGTTCATGATA
TGCCAGAGTCAGCAAAGAAGAAACAACTTATTAGACAGTTTAATAAGCAATCATTGACCCAGACACCAGG
GCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCGCGCTCCTTCAGTGGGCTTATTAAGCGG
AAGGTCCTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAGAACCCTACTCCAGAATCTGTGGCCATTG
GTGAATTGAAGGGAACCAGCAAAGAAAATAGGAACTTATTATTTTCTGGCTCTCCAGCTGTCACGATGAC
ACCAACAAGATTGAAGTGGTCTGAAGGGAAGAAAGAGGGGAAAAAAGGATTTCTCTGA

Translation (485 aa):
MPHQKLSALIDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTELVVSNITRLIDLPGTELAQL
MGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEEGIAQIYQLIEYLHKNLRVEGLFRVPGNSV
RQQILRDALNNGTDIDLESGEFHSNDVATLLKMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIP
DKDRQIEALQLLFLILPPPNRNLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNVTANDLQEN
ITKLNSGMAFMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSC
PHQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKR
KVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRLKWSEGKKEGKKGFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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