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Report for CCDS7776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7776.1 Public Homo sapiens 11 NLRP14 24 110 108 CCDS HistoryNCBI Gene:338323Re-query CCDS DB by CCDS ID:7776.1Re-query CCDS DB by GeneID:338323See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7776.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299481.5 ENSP00000299481.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299481.5Link to Ensembl Protein Viewer:ENSP00000299481.5Re-query CCDS DB by Nucleotide ID:ENST00000299481Re-query CCDS DB by Protein ID:ENSP00000299481
Original member Current member NCBI NM_176822.4 NP_789792.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_176822.4Link to Protein Sequence:NP_789792.1Re-query CCDS DB by Nucleotide ID:NM_176822Re-query CCDS DB by Protein ID:NP_789792Link to BLAST:NP_789792.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789792.1 1093 Q86W24 1093 100% 0 0

Chromosomal Locations for CCDS 7776.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 7038587 7038875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7039714 7039785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7042388 7043984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7046668 7046832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7049671 7049838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7057677 7057847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7058280 7058450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7059894 7060064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7062333 7062503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7070286 7070456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7071173 7071308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3282 nt):
ATGGCAGATTCATCATCATCTTCTTTCTTTCCTGATTTTGGGCTGCTATTGTATTTGGAGGAGCTAAACA
AAGAGGAATTAAATACATTCAAGTTATTCCTAAAGGAGACCATGGAACCTGAGCATGGCCTGACACCCTG
GAATGAAGTGAAGAAGGCCAGGCGGGAGGACCTGGCCAATTTGATGAAGAAATATTATCCAGGAGAGAAA
GCCTGGAGTGTGTCTCTCAAAATCTTTGGCAAGATGAACCTGAAGGATCTGTGTGAGAGAGCGAAAGAAG
AGATCAACTGGTCGGCCCAGACTATAGGACCAGATGATGCCAAGGCTGGAGAGACACAAGAAGATCAGGA
GGCAGTGCTGGGTGATGGAACAGAATACAGAAATAGAATAAAGGAAAAATTTTGCATCACTTGGGACAAG
AAGTCTTTGGCTGGAAAGCCTGAAGATTTCCATCATGGAATTGCAGAGAAAGATAGAAAACTGTTGGAAC
ACTTGTTCGATGTGGATGTCAAAACCGGTGCACAGCCACAGATCGTGGTGCTTCAGGGAGCTGCTGGAGT
TGGGAAAACAACCTTGGTGAGAAAGGCAATGTTAGATTGGGCAGAGGGCAGTCTCTACCAGCAGAGGTTT
AAGTATGTTTTTTATCTCAATGGGAGAGAAATTAACCAGCTGAAAGAGAGAAGCTTTGCTCAATTGATAT
CAAAGGACTGGCCCAGCACAGAAGGCCCCATTGAAGAAATCATGTACCAGCCAAGTAGCCTCTTGTTTAT
TATTGACAGTTTCGATGAACTGAACTTTGCCTTTGAAGAACCTGAGTTTGCACTGTGCGAAGACTGGACC
CAAGAACACCCAGTGTCCTTCCTCATGAGTAGTTTGCTGAGGAAAGTGATGCTCCCTGAGGCATCCTTAT
TGGTGACAACAAGACTCACAACTTCTAAGAGACTAAAGCAGTTGTTGAAGAATCACCATTATGTAGAGCT
ACTAGGAATGTCTGAGGATGCAAGAGAGGAGTATATTTACCAGTTTTTTGAAGATAAGAGGTGGGCCATG
AAAGTATTCAGTTCACTAAAAAGCAATGAGATGCTGTTTAGCATGTGCCAAGTCCCCCTAGTGTGCTGGG
CCGCTTGTACTTGTCTGAAGCAGCAAATGGAGAAGGGTGGTGATGTCACATTGACCTGCCAAACAACCAC
AGCTCTGTTTACCTGCTATATTTCTAGCTTGTTCACACCAGTAGATGGAGGCTCTCCTAGTCTACCCAAC
CAAGCCCAGCTGAGAAGACTGTGCCAAGTCGCTGCCAAAGGAATATGGACTATGACTTACGTGTTTTACA
GAGAAAATCTCAGAAGGCTTGGGTTAACTCAATCTGATGTCTCTAGTTTTATGGACAGCAATATTATTCA
GAAGGACGCAGAGTATGAAAACTGCTATGTGTTCACCCACCTTCATGTTCAGGAGTTTTTTGCAGCTATG
TTCTATATGTTGAAAGGCAGTTGGGAAGCTGGGAACCCTTCCTGCCAGCCTTTTGAAGATTTGAAGTCAT
TACTTCAAAGCACAAGTTATAAAGACCCCCATTTGACACAGATGAAGTGCTTTTTGTTTGGCCTTTTGAA
TGAAGATCGAGTAAAACAACTGGAGAGGACTTTTAACTGTAAAATGTCACTGAAGATAAAATCAAAGTTA
CTTCAGTGTATGGAAGTATTAGGAAACAGTGACTATTCTCCATCACAGCTGGGATTTCTGGAGTTGTTTC
ACTGTCTGTATGAGACTCAAGATAAAGCGTTTATAAGCCAGGCAATGAGATGTTTCCCAAAGGTTGCCAT
TAATATTTGTGAGAAAATACATTTGCTTGTATCTTCTTTCTGCCTTAAGCACTGCCGGTGTTTGCGGACC
ATCAGGCTGTCTGTAACTGTGGTATTTGAGAAGAAGATATTAAAAACAAGCCTCCCAACTAACACTTGGG
ATGGTGATCGCATTACTCACTGTTGGCAAGATCTCTGTTCTGTGCTTCATACAAATGAACACTTGAGAGA
ATTGGACCTGTACCATAGCAACCTTGATAAATCAGCAATGAATATCCTGCATCATGAACTAAGGCACCCA
AACTGTAAACTACAAAAGCTACTGTTGAAATTTATCACTTTCCCTGATGGTTGTCAGGATATCTCTACTT
CTTTGATTCATAACAAGAATCTGATGCATCTTGACCTAAAAGGGAGTGATATAGGGGATAATGGAGTAAA
GTCATTGTGTGAGGCCTTGAAACACCCAGAGTGTAAACTACAGACTCTCAGGCTGGAATCTTGCAACCTA
ACTGTATTTTGTTGTCTAAATATATCTAATGCTCTCATCAGAAGCCAGAGCCTGATATTTCTGAATCTGT
CAACCAATAATCTGTTGGATGATGGAGTGCAGCTTTTGTGTGAGGCCTTAAGACATCCAAAGTGTTATCT
AGAGAGACTGTCCTTAGAAAGCTGTGGTCTCACAGAGGCTGGCTGTGAGTATCTTTCTTTGGCTCTCATC
AGCAATAAAAGACTGACACATTTGTGCTTGGCAGACAATGTCTTGGGTGATGGTGGAGTAAAGCTTATGA
GTGATGCCCTGCAACATGCACAATGTACTCTGAAGAGCCTTGTGCTGAGGCGTTGCCATTTCACTTCACT
TAGCAGTGAATATCTGTCAACTTCTCTTCTACACAACAAGAGCCTGACGCATCTGGATCTAGGATCAAAC
TGGCTACAAGACAATGGAGTGAAGCTTCTGTGTGATGTCTTTCGGCATCCAAGCTGTAATCTTCAGGACT
TGGAATTGATGGGCTGTGTTCTCACTAATGCATGTTGTCTGGATCTGGCTTCTGTTATTTTGAATAACCC
AAACCTGAGGAGCCTGGACCTTGGGAACAACGATTTGCAGGATGATGGAGTGAAAATTCTGTGTGATGCT
TTGAGATATCCAAACTGTAACATTCAGAGGCTCGGGTTGGAATACTGTGGTTTGACATCTCTCTGCTGTC
AAGATCTCTCCTCTGCTCTTATCTGCAACAAAAGACTGATAAAAATGAATCTGACACAGAATACCTTAGG
ATATGAAGGAATTGTGAAGTTATATAAAGTCTTGAAGTCTCCTAAGTGTAAACTACAAGTTCTAGGGTTG
TGCAAAGAGGCATTTGATGAGGAAGCCCAGAAGCTGCTGGAAGCTGTGGGAGTTAGCAATCCACACTTAA
TCATTAAGCCAGATTGTAACTATCATAATGAAGAAGATGTGTCTTGGTGGTGGTGTTTCTGA

Translation (1093 aa):
MADSSSSSFFPDFGLLLYLEELNKEELNTFKLFLKETMEPEHGLTPWNEVKKARREDLANLMKKYYPGEK
AWSVSLKIFGKMNLKDLCERAKEEINWSAQTIGPDDAKAGETQEDQEAVLGDGTEYRNRIKEKFCITWDK
KSLAGKPEDFHHGIAEKDRKLLEHLFDVDVKTGAQPQIVVLQGAAGVGKTTLVRKAMLDWAEGSLYQQRF
KYVFYLNGREINQLKERSFAQLISKDWPSTEGPIEEIMYQPSSLLFIIDSFDELNFAFEEPEFALCEDWT
QEHPVSFLMSSLLRKVMLPEASLLVTTRLTTSKRLKQLLKNHHYVELLGMSEDAREEYIYQFFEDKRWAM
KVFSSLKSNEMLFSMCQVPLVCWAACTCLKQQMEKGGDVTLTCQTTTALFTCYISSLFTPVDGGSPSLPN
QAQLRRLCQVAAKGIWTMTYVFYRENLRRLGLTQSDVSSFMDSNIIQKDAEYENCYVFTHLHVQEFFAAM
FYMLKGSWEAGNPSCQPFEDLKSLLQSTSYKDPHLTQMKCFLFGLLNEDRVKQLERTFNCKMSLKIKSKL
LQCMEVLGNSDYSPSQLGFLELFHCLYETQDKAFISQAMRCFPKVAINICEKIHLLVSSFCLKHCRCLRT
IRLSVTVVFEKKILKTSLPTNTWDGDRITHCWQDLCSVLHTNEHLRELDLYHSNLDKSAMNILHHELRHP
NCKLQKLLLKFITFPDGCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNL
TVFCCLNISNALIRSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALI
SNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN
WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQDDGVKILCDA
LRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGL
CKEAFDEEAQKLLEAVGVSNPHLIIKPDCNYHNEEDVSWWWCF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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