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Report for CCDS8301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8301.1 Public Homo sapiens 11 FUT4 24 110 108 CCDS HistoryNCBI Gene:2526Re-query CCDS DB by CCDS ID:8301.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8301.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358752.4 ENSP00000351602.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358752.4Link to Ensembl Protein Viewer:ENSP00000351602.2Re-query CCDS DB by Nucleotide ID:ENST00000358752Re-query CCDS DB by Protein ID:ENSP00000351602
Original member Current member NCBI NM_002033.4 NP_002024.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002033.4Link to Protein Sequence:NP_002024.1Re-query CCDS DB by Nucleotide ID:NM_002033Re-query CCDS DB by Protein ID:NP_002024Link to BLAST:NP_002024.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002024.1 530 P22083-1 530 100% 0 0

Chromosomal Locations for CCDS 8301.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 94544134 94545726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGAGGCGCTTGTGGGGCGCGGCCCGGAAGCCCTCGGGCGCGGGCTGGGAGAAGGAGTGGGCGGAGGCGC
CGCAGGAGGCTCCCGGGGCCTGGTCGGGCCGGCTGGGCCCCGGGCGCAGTGGAAGAAAGGGACGGGCGGT
GCCCGGTTGGGCGTCCTGGCCAGCTCACCTTGCCCTGGCGGCTCGCCCCGCCCGGCACTTGGGAGGAGCA
GGGCAGGGCCCGCGGCCTTTGCATTCTGGGACCGCCCCCTTCCATTCCCGGGCCAGCGGCGAGCGGCAGC
GACGGCTGGAGCCGCAGCTACAGCATGAGAGCCGGTGCCGCTCCTCCACGCCTGCGGACGCGTGGCGAGC
GGAGGCAGCGCTGCCTGTTCGCGCCATGGGGGCACCGTGGGGCTCGCCGACGGCGGCGGCGGGCGGGCGG
CGCGGGTGGCGCCGAGGCCGGGGGCTGCCATGGACCGTCTGTGTGCTGGCGGCCGCCGGCTTGACGTGTA
CGGCGCTGATCACCTACGCTTGCTGGGGGCAGCTGCCGCCGCTGCCCTGGGCGTCGCCAACCCCGTCGCG
ACCGGTGGGCGTGCTGCTGTGGTGGGAGCCCTTCGGGGGGCGCGATAGCGCCCCGAGGCCGCCCCCTGAC
TGCCGGCTGCGCTTCAACATCAGCGGCTGCCGCCTGCTCACCGACCGCGCGTCCTACGGAGAGGCTCAGG
CCGTGCTTTTCCACCACCGCGACCTCGTGAAGGGGCCCCCCGACTGGCCCCCGCCCTGGGGCATCCAGGC
GCACACTGCCGAGGAGGTGGATCTGCGCGTGTTGGACTACGAGGAGGCAGCGGCGGCGGCAGAAGCCCTG
GCGACCTCCAGCCCCAGGCCCCCGGGCCAGCGCTGGGTTTGGATGAACTTCGAGTCGCCCTCGCACTCCC
CGGGGCTGCGAAGCCTGGCAAGTAACCTCTTCAACTGGACGCTCTCCTACCGGGCGGACTCGGACGTCTT
TGTGCCTTATGGCTACCTCTACCCCAGAAGCCACCCCGGCGACCCGCCCTCAGGCCTGGCCCCGCCACTG
TCCAGGAAACAGGGGCTGGTGGCATGGGTGGTGAGCCACTGGGACGAGCGCCAGGCCCGGGTCCGCTACT
ACCACCAACTGAGCCAACATGTGACCGTGGACGTGTTCGGCCGGGGCGGGCCGGGGCAGCCGGTGCCCGA
AATTGGGCTCCTGCACACAGTGGCCCGCTACAAGTTCTACCTGGCTTTCGAGAACTCGCAGCACCTGGAT
TATATCACCGAGAAGCTCTGGCGCAACGCGTTGCTCGCTGGGGCGGTGCCGGTGGTGCTGGGCCCAGACC
GTGCCAACTACGAGCGCTTTGTGCCCCGCGGCGCCTTCATCCACGTGGACGACTTCCCAAGTGCCTCCTC
CCTGGCCTCGTACCTGCTTTTCCTCGACCGCAACCCCGCGGTCTATCGCCGCTACTTCCACTGGCGCCGG
AGCTACGCTGTCCACATCACCTCCTTCTGGGACGAGCCTTGGTGCCGGGTGTGCCAGGCTGTACAGAGGG
CTGGGGACCGGCCCAAGAGCATACGGAACTTGGCCAGCTGGTTCGAGCGGTGA

Translation (530 aa):
MRRLWGAARKPSGAGWEKEWAEAPQEAPGAWSGRLGPGRSGRKGRAVPGWASWPAHLALAARPARHLGGA
GQGPRPLHSGTAPFHSRASGERQRRLEPQLQHESRCRSSTPADAWRAEAALPVRAMGAPWGSPTAAAGGR
RGWRRGRGLPWTVCVLAAAGLTCTALITYACWGQLPPLPWASPTPSRPVGVLLWWEPFGGRDSAPRPPPD
CRLRFNISGCRLLTDRASYGEAQAVLFHHRDLVKGPPDWPPPWGIQAHTAEEVDLRVLDYEEAAAAAEAL
ATSSPRPPGQRWVWMNFESPSHSPGLRSLASNLFNWTLSYRADSDVFVPYGYLYPRSHPGDPPSGLAPPL
SRKQGLVAWVVSHWDERQARVRYYHQLSQHVTVDVFGRGGPGQPVPEIGLLHTVARYKFYLAFENSQHLD
YITEKLWRNALLAGAVPVVLGPDRANYERFVPRGAFIHVDDFPSASSLASYLLFLDRNPAVYRRYFHWRR
SYAVHITSFWDEPWCRVCQAVQRAGDRPKSIRNLASWFER


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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