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Report for CCDS48136.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48136.1 Public Homo sapiens X CITED1 24 110 108 CCDS HistoryNCBI Gene:4435Re-query CCDS DB by CCDS ID:48136.1Re-query CCDS DB by GeneID:4435See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48136.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431381.5 ENSP00000388548.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431381.5Link to Ensembl Protein Viewer:ENSP00000388548.1Re-query CCDS DB by Nucleotide ID:ENST00000431381Re-query CCDS DB by Protein ID:ENSP00000388548
Original member Current member EBI ENST00000453707.6 ENSP00000401764.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453707.6Link to Ensembl Protein Viewer:ENSP00000401764.2Re-query CCDS DB by Nucleotide ID:ENST00000453707Re-query CCDS DB by Protein ID:ENSP00000401764
Original member Current member NCBI NM_001144885.2 NP_001138357.1 Accepted alive Link to Nucleotide Sequence:NM_001144885.2Link to Protein Sequence:NP_001138357.1Re-query CCDS DB by Nucleotide ID:NM_001144885Re-query CCDS DB by Protein ID:NP_001138357Link to BLAST:NP_001138357.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138357.1 219 Q99966-2 219 100% 0 0

Chromosomal Locations for CCDS 48136.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 72301723 72302244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72302810 72302934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72305302 72305314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (660 nt):
ATGGAACCATCCGCACAACAGCTCCAGCTGGCAGCATCACTTCCCGCCAATTTATCCAACTTCTGCCAAG
GCTCTGAAATGCCAACAACGTCGAGGCCTGCACTTGATGTCAAGGGTGGCACCTCACCTGCGAAGGAGGA
TGCCAACCAAGAGATGAGCTCCGTGGCCTACTCCAACCTTGCGGTGAAAGATCGCAAAGCAGTGGCCATT
CTGCACTACCCTGGGGTAGCCTCAAATGGAACCAAGGCCAGTGGGGCTCCCACTAGTTCCTCGGGATCTC
CAATAGGCTCTCCTACAACCACCCCTCCCACTAAACCCCCATCCTTCAACCTGCACCCCGCCCCTCACTT
GCTGGCTAGTATGCACCTGCAGAAACTTAATAGCCAGTATCAGGGGATGGCTGCTGCCACTCCAGGCCAA
CCCGGGGAGGCAGGACCCCTGCAAAACTGGGACTTTGGGGCCCAGGCGGGAGGGGCAGAATCACTCTCTC
CTTCTGCTGGTGCCCAGAGCCCTGCTATCATCGATTCGGACCCAGTGGATGAGGAAGTGCTGATGTCGCT
GGTGGTGGAACTGGGGTTGGACCGAGCCAATGAGCTTCCGGAGCTGTGGCTGGGGCAGAATGAGTTTGAC
TTCACTGCGGACTTTCCATCTAGCTGCTAA

Translation (219 aa):
MEPSAQQLQLAASLPANLSNFCQGSEMPTTSRPALDVKGGTSPAKEDANQEMSSVAYSNLAVKDRKAVAI
LHYPGVASNGTKASGAPTSSSGSPIGSPTTTPPTKPPSFNLHPAPHLLASMHLQKLNSQYQGMAAATPGQ
PGEAGPLQNWDFGAQAGGAESLSPSAGAQSPAIIDSDPVDEEVLMSLVVELGLDRANELPELWLGQNEFD
FTADFPSSC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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